RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 LzicQ8K3C3 190 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tcp11x2A2AEI7 503 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Sh3tc2Q80VA5 1289 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pcdhb21Q91V48 774 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Slit1Q80TR4 1531 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Kcnh4A2A5F7 1018 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm5152L7N200 190 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 PuraP42669 321 aaKnown RBP11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Nudt18Q3U2V3 323 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Cd248Q91V98 765 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Prpf6Q91YR7 941 aaKnown RBP11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 GatbQ99JT1 557 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Nrxn1Q9CS84 1514 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Dthd1E9PZX1 795 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Eno3P21550 434 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Dynll1P63168 89 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Stip1Q60864 543 aaKnown RBP11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Mtmr1Q9Z2C4 669 aa11.03□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gimd1E9PW74 217 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tsta3P23591 321 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Yipf3Q3UDR8 347 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Sin3bQ62141 1098 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Jph2Q9ET78 696 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 L3mbtl1A2A5N8 826 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm3371F7CQW8 167 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm4312K9J7E2 289 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pstpip1P97814 415 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pramef12Q9D2F1 463 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Krt17Q9QWL7 433 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Phf2Q9WTU0 1096 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Myl1P05977 188 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Nr5a1P33242 462 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Usp10P52479 792 aaKnown RBP11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Znf827Q505G8 1078 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Q8BGD0 127 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ces1Q8VCC2 565 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Mrpl50Q8VDT9 159 aaKnown RBP11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Cmtr1Q9DBC3 837 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Nfu1Q9QZ23 255 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gja10Q9WUS4 505 aa11.02□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm7168A0AUV4 508 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Abcb5B5X0E4 1255 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm3182K7N6T8 263 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 E330034G19RikQ3UWX6 351 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Hspa1aQ61696 641 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Skiv2lQ6NZR5 1244 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Dclk2Q6PGN3 756 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Trim9Q8C7M3 817 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pex19Q8VCI5 299 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ten1Q9D7K2 161 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Fxr2Q9WVR4 673 aaKnown RBP11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Lzts3A2AHG0 700 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Akr1b10G5E895 316 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Sh3gl1Q62419 368 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 RgmbQ7TQ33 436 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Dach2Q925Q8 634 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Map2P20357 1828 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Slc39a2G3X943 309 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 DffaO54786 331 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Kbtbd13Q8C828 458 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 CntrobQ8CB62 887 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Abcf3Q8K268 709 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Satb2Q8VI24 733 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 EtfbQ9DCW4 255 aaKnown RBP11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Rpf2Q9JJ80 306 aaKnown RBP11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm45261A0A1B0GSP6 197 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 FntaQ61239 377 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ube2oQ6ZPJ3 1288 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gramd1bQ80TI0 738 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 YwhabQ9CQV8 246 aaKnown RBP11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Clca1Q9D7Z6 913 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Mrpl4Q9DCU6 294 aaKnown RBP11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Abcc10Q8R4P9 1501 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Tlk2O55047 718 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Prrg3Q6PAQ9 231 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Sarm1Q6PDS3 724 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ankrd13aQ80UP5 588 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Syf2Q9D198 242 aaKnown RBP11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 RecqlQ9Z129 648 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Hsf3D0VYS2 492 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Stx3Q64704 289 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Krt72Q6IME9 520 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Lrig3Q6P1C6 1117 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 P3h2Q8CG71 703 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Kank3Q9Z1P7 791 aa11.02□□□□□ -0.65
Scn8a-201ENSMUST00000082209 UmpsP13439 481 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Anxa5P48036 319 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 PtpreP49446 699 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 UrosP51163 265 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Epas1P97481 874 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Oog4Q4G0C7 502 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Xlr3cQ61806 226 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Runx1t1Q61909 577 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Acap2Q6ZQK5 770 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pdia6Q922R8 440 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Mrpl46Q9EQI8 283 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pdzrn4E9PUZ9 1014 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Zfp651E9PZ11 729 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm3187M0QWW3 260 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Prkaa1Q5EG47 559 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms