RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Stk38lQ7TSE6 464 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Kcnv2Q8CFS6 562 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Rbm31yQ9D3U4 565 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Serpina9Q9D7D2 418 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Cnot8Q9D8X5 292 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Phf2Q9WTU0 1096 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 C87977A2A958 498 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 PrphP15331 475 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ephb2P54763 986 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ptprn2P80560 1001 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Six1Q62231 284 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Pih1h3bQ8C6P5 218 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Sppl3Q9CUS9 384 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Tdrd12Q9CWU0 1215 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Kcnh7Q9ER47 1195 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Cnga3Q9JJZ8 631 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Drg2Q9QXB9 364 aaKnown RBP10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ubr3Q5U430 1889 aa10.49□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Olfr247E9PVJ7 320 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Magea4F2Z493 315 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gm3182K7N6T8 263 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Olfr819K7N727 320 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Casp14O89094 257 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 LdhbP16125 334 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Oprl1P35377 367 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Brd9Q3UQU0 596 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Taok1Q5F2E8 1001 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ppp1r13bQ62415 1087 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Q8BGC1 442 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Apol9bQ8C7I4 310 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Kiaa0391Q8JZY4 584 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Apol9aQ8VDU3 310 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 WaslQ91YD9 501 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Chordc1Q9D1P4 331 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Rnf225Q9D7D1 332 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 IkbipQ9DBZ1 373 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Dock2Q8C3J5 1828 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Csf1rP09581 977 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ugt1a2P70691 533 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Aars2Q14CH7 980 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Tigd5Q499M4 642 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Sema5aQ62217 1077 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Q6DFW0 481 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Dnajc8Q6NZB0 253 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Kiaa1328Q6NZK5 612 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Msantd2Q6NZR2 559 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Xpnpep1Q6P1B1 623 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Zswim5Q80TC6 1188 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ubap1Q8BH48 502 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 AgpsQ8C0I1 645 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Fam20aQ8CID3 541 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 SynrgQ5SV85 1306 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Mia3Q8BI84 1930 aa10.48□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Bpifb9bA2AJD1 591 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 DgkhD3YXJ0 1156 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Kcnk16G5E845 292 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 UgcgO88693 394 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 RxrbP28704 520 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Adcy8P97490 1249 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 NfibP97863 570 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gspt2Q149F3 632 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Odr4Q4PJX1 447 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ntrk3Q6VNS1 825 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Fmnl3Q6ZPF4 1028 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Bpifb9aQ80XI7 591 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Dusp4Q8BFV3 398 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Mill1Q8HWE7 395 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Dppa3Q8QZY3 150 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Apol7bB1AQP7 369 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Zfy1P10925 782 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 rp9P97762 213 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Eepd1Q3TGW2 569 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Apol7eQ3UZ24 369 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 E2f8Q58FA4 860 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ccdc125Q5U465 500 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Cnot7Q60809 285 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Trim21Q62191 470 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Sec23ipQ6NZC7 998 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 PrimpolQ6P1E7 537 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Inpp4bQ6P1Y8 924 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Plekhg6Q8R0J1 787 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Spdl1Q923A2 608 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Sec14l2Q99J08 403 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Ttc6G3UYY4 1857 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Vmn2r63E9Q0K5 859 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Gm9268E9Q0M3 861 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Vmn2r62K7N712 859 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Sema6bO54951 886 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Rrm1P07742 792 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Eef1dP57776 281 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Stmn4P63042 189 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Smarcad1Q04692 1021 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 CcnjlQ5SRT8 387 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Krt77Q6IFZ6 572 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 SnphQ80U23 495 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Sestd1Q80UK0 696 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 D630039A03RikQ8K0M7 236 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Lpgat1Q91YX5 370 aa10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Mrpl11Q9CQF0 192 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-202ENSMUST00000053440 Borcs6Q9D6W8 360 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms