RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Efl1Q8C0D5 1127 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Iws1Q8C1D8 766 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Cep19Q9CQA8 163 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Atp6v1e2Q9D593 226 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Tll2Q9WVM6 1012 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 RptorQ8K4Q0 1335 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Gm45837F7D3W5 961 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 TazI7HJS2 263 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Gm5814J3QP80 125 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Phactr1Q2M3X8 580 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 P4ha1Q60715 534 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Sema5aQ62217 1077 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Tmem120aQ8C1E7 343 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Znf428Q8C1M2 176 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Pde2aQ922S4 916 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Mrfap1Q9CQL7 125 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 4930449I24RikQ9D5E3 319 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Klrc2Q9WTJ9 238 aa19.73■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Myo1eE9Q634 1107 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Vmn2r15L7N2A0 855 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Marcksl1P28667 200 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 SpoplQ2M2N2 392 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Zfp341Q6PGC9 846 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Pkn3Q8K045 878 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 D630039A03RikQ8K0M7 236 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Btbd6Q8K2J9 488 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Nr3c2Q8VII8 978 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 PawrQ925B0 333 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Xrcc5P27641 732 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Msh2P43247 935 aaKnown RBP19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Vav2Q60992 868 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Usp20Q8C6M1 916 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Lrrc14Q8VC16 493 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Atp5c1Q91VR2 298 aaKnown RBP19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Thumpd2Q9CZB3 528 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Rnf4Q9QZS2 194 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Cacna2d3Q9Z1L5 1091 aa19.72■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Lrrc74aA0A1Y7VMD6 494 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Gm21973F6WEZ7 68 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Eftud2O08810 971 aaKnown RBP19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 RxrbP28704 520 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Gm10488Q4KL05 212 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Phactr4Q501J7 694 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Bicd1Q8BR07 835 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Ccdc186Q8C9S4 917 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 MesdQ9ERE7 224 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Drg2Q9QXB9 364 aaKnown RBP19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Rfwd2Q9R1A8 733 aaKnown RBP19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Rrm1P07742 792 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Tfap2bQ61313 459 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Myo6Q64331 1265 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Gpr156Q6PCP7 798 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 TbckQ8BM85 762 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Tmem161bQ8C2L6 487 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Tdrd12Q9CWU0 1215 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 GrapQ9CX99 217 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 PrameQ9D4Z5 464 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Ccdc124Q9D8X2 217 aaKnown RBP19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 PycardQ9EPB4 193 aa19.71■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Olfr247E9PVJ7 320 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Olfr819K7N727 320 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 GabpaQ00422 454 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Serpinb6Q60854 378 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Shtn1Q8K2Q9 631 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Prss51A0A286YDY8 319 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Unc13dB2RUP2 1085 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Rasal2E9PW37 1286 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Lig3P97386 1015 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 FancbQ5XJY6 703 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Krt12Q64291 487 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Gpd2Q64521 727 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 CbarpQ66L44 698 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Actl9Q8CG27 415 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Gtf2ird1Q9JI57 1104 aaKnown RBP19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Mta2Q9R190 668 aa19.7■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Rps6P62754 249 aaKnown RBP19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Edem3Q2HXL6 931 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Bpifb5Q3UQ05 490 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Lgr6Q3UVD5 967 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Ntrk3Q6VNS1 825 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 NkapQ9D0F4 415 aaKnown RBP19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Cnot8Q9D8X5 292 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Cacna2d1O08532 1103 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Hoxc13P50207 328 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Cracr2aQ3UP38 310 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Pnma1Q8C1C8 353 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 C130026I21RikQ8C898 291 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Commd10Q8JZY2 202 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Tom1l1Q923U0 474 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 1700109H08RikQ9D9C0 210 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 IdeQ9JHR7 1019 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Serpinb6cW4VSP4 379 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Bpifb9bA2AJD1 591 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Pitpnm1O35954 1243 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Kif5cP28738 956 aaKnown RBP19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Erbb2P70424 1256 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Spink5Q148R4 1017 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Skap1Q3UUV5 355 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 4933427I04RikQ3V053 235 aa19.69■□□□□ 0.74
Ccdc3-201ENSMUST00000027988 Nt5c2Q3V1L4 560 aa19.69■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms