RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Nedd1P33215 660 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 RenbpP82343 430 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 G3bp2P97379 482 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Mark3Q03141 753 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 RelaQ04207 549 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 WhrnQ80VW5 918 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm5622Q810Q0 167 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Igdcc3Q8BQC3 813 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pcdhgb4Q91XX6 912 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gbp7Q91Z40 638 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Hspbp1Q99P31 357 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Igf2bp3Q9CPN8 579 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Tmed5Q9CXE7 229 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 PtprvP70289 1705 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 PfasQ5SUR0 1337 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Disp2Q8CIP5 1345 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm1758F6VZZ1 202 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 CaluO35887 315 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 DtnbO70585 659 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Fgd3O88842 733 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Syt2P46097 422 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Dynlt1P51807 113 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Spout1Q3UHX9 385 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Pabpn1lQ5XFR0 273 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ipo5Q8BKC5 1097 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gpr150Q8BL07 427 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Usp38Q8BW70 1042 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Dennd2aQ8C4S8 1000 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Calhm4Q8CE93 315 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ints9Q8K114 658 aaKnown RBP11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Dqx1Q924H9 718 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Nsmce1Q9D720 266 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Ifi202Q9R002 445 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Gm28036V9GXJ1 658 aa11.59□□□□□ -0.55
Msh3-201ENSMUST00000022220 Adgrf5G5E8Q8 1348 aa11.58□□□□□ -0.55
Msh3-201ENSMUST00000022220 SynrgQ5SV85 1306 aa11.58□□□□□ -0.55
Msh3-201ENSMUST00000022220 Myh2G3UW82 1942 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm45208A0A140LJ36 292 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fgfr4Q03142 799 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ccdc125Q5U465 500 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 A1cfQ5YD48 595 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rimbp2Q80U40 1072 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Znf76Q8BMU0 568 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gnl3Q8CI11 538 aaKnown RBP11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kat14Q8CID0 779 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Vmn1r191Q8K4D0 298 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Dnajc19Q9CQV7 116 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ccdc88cQ6VGS5 2009 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm8994E9PV04 411 aaKnown RBP11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 AfmO89020 608 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ets2P15037 468 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fcer2P20693 331 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cbx2P30658 519 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 ProcP33587 460 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Adcy8P97490 1249 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Palb2Q3U0P1 1104 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Miga1Q4QQM5 600 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Klra7Q60654 280 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 SkiQ60698 725 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Samhd1Q60710 627 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cpa1Q7TPZ8 419 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Taco1Q8K0Z7 294 aaKnown RBP11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cdc26Q99JP4 85 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Klrc1Q9Z202 244 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Col4a1P02463 1669 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pnpla6Q3TRM4 1355 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Olfr310B2RVZ1 332 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Xirp1O70373 1129 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mpp3O88910 568 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Nol4P60954 483 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mcl1P97287 331 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Smarcad1Q04692 1021 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mphosph8Q3TYA6 858 aaKnown RBP11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Lrch2Q3UMG5 773 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ece1Q4PZA2 769 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Nudt16Q6P3D0 195 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ago2Q8CJG0 860 aaKnown RBP11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gimap4Q99JY3 219 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tdrd1Q99MV1 1172 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Smyd3Q9CWR2 428 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cdc42ep4Q9JM96 349 aaKnown RBP11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Limd1Q9QXD8 668 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Slc12a7Q9WVL3 1083 aa11.58□□□□□ -0.56
Msh3-201ENSMUST00000022220 Usp31E9Q6Y8 1344 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Osbpl9A2A8Z1 736 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ttll10A4Q9F3 704 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm14525B1AZA0 212 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm2012B1B0R1 212 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm5814J3QP80 125 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 GclmO09172 274 aaKnown RBP11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Il13ra2O88786 383 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 En2P09066 324 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 LeprP48356 1162 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ccdc110Q3V125 848 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Birc2Q62210 612 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm14819Q62478 212 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gga2Q6P5E6 603 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mindy1Q76LS9 468 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 SugctQ7TNE1 436 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Bank1Q80VH0 783 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms