RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C YBR013CP38215 129 aa4.46□□□□□ -1.7
NUP116YMR047C FAD1P38913 306 aa4.46□□□□□ -1.7
NUP116YMR047C MET30P39014 640 aa4.46□□□□□ -1.7
NUP116YMR047C CUP9P41817 306 aa4.46□□□□□ -1.7
NUP116YMR047C YGL204CP53089 101 aa4.46□□□□□ -1.7
NUP116YMR047C IDP3P53982 420 aaKnown RBP4.46□□□□□ -1.7
NUP116YMR047C HXT11P54862 567 aa4.46□□□□□ -1.7
NUP116YMR047C ELP4Q02884 456 aaKnown RBP4.46□□□□□ -1.7
NUP116YMR047C YMR310CQ04867 317 aaPredicted RBP4.46□□□□□ -1.7
NUP116YMR047C ENT4Q07872 247 aa4.46□□□□□ -1.7
NUP116YMR047C CDC28P00546 298 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C ERG9P29704 444 aa4.45□□□□□ -1.7
NUP116YMR047C ERG3P32353 365 aa4.45□□□□□ -1.7
NUP116YMR047C MTH1P35198 433 aa4.45□□□□□ -1.7
NUP116YMR047C RPS27AP35997 82 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C IST2P38250 946 aa4.45□□□□□ -1.7
NUP116YMR047C RPS27BP38711 82 aa4.45□□□□□ -1.7
NUP116YMR047C YJL068CP40363 299 aa4.45□□□□□ -1.7
NUP116YMR047C SCY1P53009 804 aa4.45□□□□□ -1.7
NUP116YMR047C TNA1P53322 534 aa4.45□□□□□ -1.7
NUP116YMR047C CTF19Q02732 369 aa4.45□□□□□ -1.7
NUP116YMR047C YHC1Q05900 231 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C YOR283WQ12040 230 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C SSA3P09435 649 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C ZRC1P20107 442 aa4.45□□□□□ -1.7
NUP116YMR047C NUP1P20676 1076 aa4.45□□□□□ -1.7
NUP116YMR047C NPR1P22211 790 aa4.45□□□□□ -1.7
NUP116YMR047C TRX3P25372 127 aa4.45□□□□□ -1.7
NUP116YMR047C SUA5P32579 426 aa4.45□□□□□ -1.7
NUP116YMR047C EAP1P36041 632 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C YBR285WP38354 144 aa4.45□□□□□ -1.7
NUP116YMR047C YHR210CP38893 341 aa4.45□□□□□ -1.7
NUP116YMR047C AGP3P43548 558 aa4.45□□□□□ -1.7
NUP116YMR047C EFM3P47163 339 aa4.45□□□□□ -1.7
NUP116YMR047C MRK1P50873 501 aa4.45□□□□□ -1.7
NUP116YMR047C YMR099CQ03161 297 aaKnown RBP4.45□□□□□ -1.7
NUP116YMR047C EKI1Q03764 534 aa4.45□□□□□ -1.7
NUP116YMR047C PEX30Q06169 523 aa4.45□□□□□ -1.7
NUP116YMR047C YPR202WQ08993 238 aa4.45□□□□□ -1.7
NUP116YMR047C TRP4P07285 380 aaPredicted RBP4.44□□□□□ -1.7
NUP116YMR047C CBS1P14066 229 aa4.44□□□□□ -1.7
NUP116YMR047C ARE1P25628 610 aa4.44□□□□□ -1.7
NUP116YMR047C YOR062CP36025 268 aa4.44□□□□□ -1.7
NUP116YMR047C BNA4P38169 460 aa4.44□□□□□ -1.7
NUP116YMR047C GPI16P38875 610 aa4.44□□□□□ -1.7
NUP116YMR047C GDS1P41913 522 aa4.44□□□□□ -1.7
NUP116YMR047C TAX4P47030 604 aa4.44□□□□□ -1.7
NUP116YMR047C YPT32P51996 222 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C YGR066CP53242 292 aa4.44□□□□□ -1.7
NUP116YMR047C INN1P53901 409 aa4.44□□□□□ -1.7
NUP116YMR047C NAT4Q04751 285 aa4.44□□□□□ -1.7
NUP116YMR047C YOL159CQ08300 171 aa4.44□□□□□ -1.7
NUP116YMR047C YTM1Q12024 460 aaPredicted RBP4.44□□□□□ -1.7
NUP116YMR047C NSL1Q12143 216 aa4.44□□□□□ -1.7
NUP116YMR047C ZWF1P11412 505 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C PDX1P16451 410 aa4.44□□□□□ -1.7
NUP116YMR047C VAC17P25591 423 aa4.44□□□□□ -1.7
NUP116YMR047C CPR3P25719 182 aa4.44□□□□□ -1.7
NUP116YMR047C RRP4P38792 359 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C RMD6P39975 231 aa4.44□□□□□ -1.7
NUP116YMR047C YER085CP40058 173 aa4.44□□□□□ -1.7
NUP116YMR047C PFK26P40433 827 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C IRC18P47056 224 aa4.44□□□□□ -1.7
NUP116YMR047C DIA3P52290 468 aa4.44□□□□□ -1.7
NUP116YMR047C AIF1P52923 378 aa4.44□□□□□ -1.7
NUP116YMR047C VPS73P53142 486 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C JAC1P53193 184 aa4.44□□□□□ -1.7
NUP116YMR047C GRX5Q02784 150 aa4.44□□□□□ -1.7
NUP116YMR047C BER1Q06688 274 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C MMT2Q08970 484 aa4.44□□□□□ -1.7
NUP116YMR047C YDL176WQ12027 708 aa4.44□□□□□ -1.7
NUP116YMR047C YOR342CQ12182 319 aa4.44□□□□□ -1.7
NUP116YMR047C RDL1Q12305 139 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C AAC1P04710 309 aa4.44□□□□□ -1.7
NUP116YMR047C RPP2AP05319 106 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C MRPL44P19956 98 aa4.44□□□□□ -1.7
NUP116YMR047C MKK1P32490 508 aa4.44□□□□□ -1.7
NUP116YMR047C WSS1P38838 269 aa4.44□□□□□ -1.7
NUP116YMR047C PMT6P42934 759 aa4.44□□□□□ -1.7
NUP116YMR047C YAE1P47118 141 aaPredicted RBP4.44□□□□□ -1.7
NUP116YMR047C SNN1P48232 102 aa4.44□□□□□ -1.7
NUP116YMR047C UBC9P50623 157 aaPredicted RBP4.44□□□□□ -1.7
NUP116YMR047C ROG1P53118 685 aa4.44□□□□□ -1.7
NUP116YMR047C SSU72P53538 206 aaPredicted RBP4.44□□□□□ -1.7
NUP116YMR047C YNL140CP53910 189 aa4.44□□□□□ -1.7
NUP116YMR047C ACT1P60010 375 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C NAN1Q02931 896 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C CAC2Q04199 468 aa4.44□□□□□ -1.7
NUP116YMR047C EMG1Q06287 252 aaKnown RBP4.44□□□□□ -1.7
NUP116YMR047C ENV7Q12003 364 aa4.44□□□□□ -1.7
NUP116YMR047C HER1Q12276 1246 aa4.44□□□□□ -1.7
NUP116YMR047C RPL9AP05738 191 aaKnown RBP4.43□□□□□ -1.7
NUP116YMR047C RHO1P06780 209 aaKnown RBP4.43□□□□□ -1.7
NUP116YMR047C YCL049CP25577 312 aa4.43□□□□□ -1.7
NUP116YMR047C BUB2P26448 306 aaPredicted RBP4.43□□□□□ -1.7
NUP116YMR047C AFG1P32317 509 aa4.43□□□□□ -1.7
NUP116YMR047C ARO4P32449 370 aaKnown RBP4.43□□□□□ -1.7
NUP116YMR047C MDL1P33310 695 aa4.43□□□□□ -1.7
NUP116YMR047C CBT1P36038 271 aaPredicted RBP4.43□□□□□ -1.7
NUP116YMR047C FIG1P38224 298 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms