RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C FRE6Q12473 712 aa3.36□□□□□ -1.87
SDS3YIL084C BLM10P43583 2143 aa3.35□□□□□ -1.87
SDS3YIL084C BPH1P25356 2167 aa3.35□□□□□ -1.87
SDS3YIL084C RNA1P11745 407 aaKnown RBP3.35□□□□□ -1.87
SDS3YIL084C FAA1P30624 700 aaKnown RBP3.35□□□□□ -1.87
SDS3YIL084C NUP2P32499 720 aa3.35□□□□□ -1.87
SDS3YIL084C RPS27AP35997 82 aaKnown RBP3.35□□□□□ -1.87
SDS3YIL084C SOL2P37262 315 aa3.35□□□□□ -1.87
SDS3YIL084C MAK5P38112 773 aaPredicted RBP3.35□□□□□ -1.87
SDS3YIL084C ECM8P38246 354 aa3.35□□□□□ -1.87
SDS3YIL084C YSW1P38280 609 aa3.35□□□□□ -1.87
SDS3YIL084C RPS27BP38711 82 aa3.35□□□□□ -1.87
SDS3YIL084C YHR127WP38833 243 aaKnown RBP3.35□□□□□ -1.87
SDS3YIL084C YNL208WP40159 199 aaKnown RBP3.35□□□□□ -1.87
SDS3YIL084C GAB1P41733 394 aa3.35□□□□□ -1.87
SDS3YIL084C YPL107WQ02873 248 aa3.35□□□□□ -1.87
SDS3YIL084C YDR209CQ03480 137 aa3.35□□□□□ -1.87
SDS3YIL084C YMR010WQ03687 405 aa3.35□□□□□ -1.87
SDS3YIL084C ERV41Q04651 352 aa3.35□□□□□ -1.87
SDS3YIL084C YPR091CQ06833 770 aa3.35□□□□□ -1.87
SDS3YIL084C YDL114WQ07530 308 aa3.35□□□□□ -1.87
SDS3YIL084C MDM32Q12171 622 aa3.35□□□□□ -1.87
SDS3YIL084C YDR018CQ12185 396 aa3.35□□□□□ -1.87
SDS3YIL084C PST1Q12355 444 aa3.35□□□□□ -1.87
SDS3YIL084C GTT2Q12390 233 aa3.35□□□□□ -1.87
SDS3YIL084C PCL9Q12477 304 aa3.35□□□□□ -1.87
SDS3YIL084C TIR2P33890 251 aa3.34□□□□□ -1.87
SDS3YIL084C EBP2P36049 427 aaKnown RBP3.34□□□□□ -1.87
SDS3YIL084C PCH2P38126 564 aa3.34□□□□□ -1.87
SDS3YIL084C MRP21P38175 177 aa3.34□□□□□ -1.87
SDS3YIL084C SMF2P38778 549 aa3.34□□□□□ -1.87
SDS3YIL084C MIG3P39943 394 aa3.34□□□□□ -1.87
SDS3YIL084C DFG10P40526 253 aa3.34□□□□□ -1.87
SDS3YIL084C HYR1P40581 163 aaKnown RBP3.34□□□□□ -1.87
SDS3YIL084C YLR152CP54072 576 aa3.34□□□□□ -1.87
SDS3YIL084C PET117Q02771 107 aa3.34□□□□□ -1.87
SDS3YIL084C ADD37Q03233 198 aa3.34□□□□□ -1.87
SDS3YIL084C SLD7Q08457 257 aa3.34□□□□□ -1.87
SDS3YIL084C PEX27Q08580 376 aa3.34□□□□□ -1.87
SDS3YIL084C YOR376WQ08900 122 aa3.34□□□□□ -1.87
SDS3YIL084C MMT2Q08970 484 aa3.34□□□□□ -1.87
SDS3YIL084C FCY22Q12119 530 aa3.34□□□□□ -1.87
SDS3YIL084C SPS100P13130 326 aa3.33□□□□□ -1.88
SDS3YIL084C KRE6P32486 720 aa3.33□□□□□ -1.88
SDS3YIL084C TOA2P32774 122 aa3.33□□□□□ -1.88
SDS3YIL084C TIP20P33891 701 aa3.33□□□□□ -1.88
SDS3YIL084C YHR177WP38867 453 aa3.33□□□□□ -1.88
SDS3YIL084C SEO1P39709 593 aa3.33□□□□□ -1.88
SDS3YIL084C OXA1P39952 402 aa3.33□□□□□ -1.88
SDS3YIL084C EGT2P42835 1041 aa3.33□□□□□ -1.88
SDS3YIL084C YFL012WP43580 148 aa3.33□□□□□ -1.88
SDS3YIL084C MPS2P53159 387 aa3.33□□□□□ -1.88
SDS3YIL084C CRH1P53301 507 aa3.33□□□□□ -1.88
SDS3YIL084C LIP2Q06005 328 aa3.33□□□□□ -1.88
SDS3YIL084C YOR012WQ12351 137 aa3.33□□□□□ -1.88
SDS3YIL084C MMS21P38632 267 aa3.32□□□□□ -1.88
SDS3YIL084C RPL10P41805 221 aaKnown RBP3.32□□□□□ -1.88
SDS3YIL084C SEC27P41811 889 aaKnown RBP3.32□□□□□ -1.88
SDS3YIL084C ATG18P43601 500 aa3.32□□□□□ -1.88
SDS3YIL084C BNS1P50084 137 aa3.32□□□□□ -1.88
SDS3YIL084C HMS1Q12398 434 aa3.32□□□□□ -1.88
SDS3YIL084C YLR462WO13556 202 aa3.31□□□□□ -1.88
SDS3YIL084C MSS116P15424 664 aaKnown RBP3.31□□□□□ -1.88
SDS3YIL084C FUN26P31381 517 aa3.31□□□□□ -1.88
SDS3YIL084C PMT2P31382 759 aa3.31□□□□□ -1.88
SDS3YIL084C HXT1P32465 570 aa3.31□□□□□ -1.88
SDS3YIL084C LAS1P36146 502 aaPredicted RBP3.31□□□□□ -1.88
SDS3YIL084C YHL049CP38722 271 aa3.31□□□□□ -1.88
SDS3YIL084C EFM1P38732 585 aa3.31□□□□□ -1.88
SDS3YIL084C YDR089WP38966 869 aa3.31□□□□□ -1.88
SDS3YIL084C LCP5P40079 357 aaPredicted RBP3.31□□□□□ -1.88
SDS3YIL084C SNL1P40548 159 aa3.31□□□□□ -1.88
SDS3YIL084C YFL064CP43540 174 aa3.31□□□□□ -1.88
SDS3YIL084C TIS11P47977 285 aa3.31□□□□□ -1.88
SDS3YIL084C BIO3P50277 480 aa3.31□□□□□ -1.88
SDS3YIL084C MKC7P53379 596 aa3.31□□□□□ -1.88
SDS3YIL084C PRP38Q00723 242 aaPredicted RBP3.31□□□□□ -1.88
SDS3YIL084C BOP2Q06150 570 aa3.31□□□□□ -1.88
SDS3YIL084C YBL111CQ3E7Y5 667 aa3.31□□□□□ -1.88
SDS3YIL084C QCR6P00127 147 aa3.3□□□□□ -1.88
SDS3YIL084C HSP26P15992 214 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SDS3YIL084C DAP2P18962 818 aa3.3□□□□□ -1.88
SDS3YIL084C TAH1P25638 111 aaPredicted RBP3.3□□□□□ -1.88
SDS3YIL084C MSK1P32048 576 aa3.3□□□□□ -1.88
SDS3YIL084C SPO23P33757 523 aa3.3□□□□□ -1.88
SDS3YIL084C YPT52P36018 234 aaKnown RBP3.3□□□□□ -1.88
SDS3YIL084C ANR2P36090 516 aaPredicted RBP3.3□□□□□ -1.88
SDS3YIL084C SEC9P40357 651 aa3.3□□□□□ -1.88
SDS3YIL084C LYS12P40495 371 aaKnown RBP3.3□□□□□ -1.88
SDS3YIL084C UTP25P40498 721 aaKnown RBP3.3□□□□□ -1.88
SDS3YIL084C RPA34P47006 233 aaPredicted RBP3.3□□□□□ -1.88
SDS3YIL084C HOC1P47124 396 aa3.3□□□□□ -1.88
SDS3YIL084C YNR068CP53754 272 aa3.3□□□□□ -1.88
SDS3YIL084C HAL1Q01766 294 aa3.3□□□□□ -1.88
SDS3YIL084C MFG1Q07684 458 aa3.3□□□□□ -1.88
SDS3YIL084C NFI1Q12216 726 aa3.3□□□□□ -1.88
SDS3YIL084C PRP46Q12417 451 aaPredicted RBP3.3□□□□□ -1.88
SDS3YIL084C STE2D6VTK4 431 aa3.29□□□□□ -1.88
SDS3YIL084C PCL1P24867 279 aa3.29□□□□□ -1.88
SDS3YIL084C CDC50P25656 391 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms