RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C RKM5Q12367 367 aa3□□□□□ -1.93
CDC40YDR364C MHT1Q12525 324 aa3□□□□□ -1.93
CDC40YDR364C SEN1Q00416 2231 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C RAD7P06779 565 aa2.99□□□□□ -1.93
CDC40YDR364C PHO2P07269 559 aa2.99□□□□□ -1.93
CDC40YDR364C FBA1P14540 359 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C SAR1P20606 190 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C SCL1P21243 252 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C YCP4P25349 247 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C RPS2P25443 254 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C MSK1P32048 576 aa2.99□□□□□ -1.93
CDC40YDR364C YPS1P32329 569 aa2.99□□□□□ -1.93
CDC40YDR364C SPO23P33757 523 aa2.99□□□□□ -1.93
CDC40YDR364C SRX1P36077 127 aa2.99□□□□□ -1.93
CDC40YDR364C YKL070WP36087 169 aa2.99□□□□□ -1.93
CDC40YDR364C TRM7P38238 310 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C RTC2P38279 296 aa2.99□□□□□ -1.93
CDC40YDR364C FLO5P38894 1075 aa2.99□□□□□ -1.93
CDC40YDR364C BFR1P38934 470 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
CDC40YDR364C GGC1P38988 300 aa2.99□□□□□ -1.93
CDC40YDR364C PHO90P39535 881 aa2.99□□□□□ -1.93
CDC40YDR364C MTW1P39731 289 aa2.99□□□□□ -1.93
CDC40YDR364C ISC1P40015 477 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C FAU1P40099 211 aa2.99□□□□□ -1.93
CDC40YDR364C APQ12P40532 138 aa2.99□□□□□ -1.93
CDC40YDR364C RIB4P50861 169 aaPredicted RBP2.99□□□□□ -1.93
CDC40YDR364C RMR1P53060 241 aa2.99□□□□□ -1.93
CDC40YDR364C YGL185CP53100 379 aa2.99□□□□□ -1.93
CDC40YDR364C DBP6P53734 629 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C GOR1P53839 350 aa2.99□□□□□ -1.93
CDC40YDR364C MRP51Q02950 344 aa2.99□□□□□ -1.93
CDC40YDR364C ATC1Q04005 294 aa2.99□□□□□ -1.93
CDC40YDR364C SSQ1Q05931 657 aaPredicted RBP2.99□□□□□ -1.93
CDC40YDR364C VPS74Q06385 345 aa2.99□□□□□ -1.93
CDC40YDR364C GPI11Q06636 219 aa2.99□□□□□ -1.93
CDC40YDR364C SNA4Q07549 140 aa2.99□□□□□ -1.93
CDC40YDR364C RPN8Q08723 338 aaKnown RBP2.99□□□□□ -1.93
CDC40YDR364C GET4Q12125 312 aa2.99□□□□□ -1.93
CDC40YDR364C RNH203Q12338 110 aa2.99□□□□□ -1.93
CDC40YDR364C CCH1P50077 2039 aa2.98□□□□□ -1.93
CDC40YDR364C SNF4P12904 322 aa2.98□□□□□ -1.93
CDC40YDR364C TRX3P25372 127 aa2.98□□□□□ -1.93
CDC40YDR364C BUB3P26449 341 aa2.98□□□□□ -1.93
CDC40YDR364C ADE1P27616 306 aa2.98□□□□□ -1.93
CDC40YDR364C COQ3P27680 312 aa2.98□□□□□ -1.93
CDC40YDR364C NTG1P31378 399 aa2.98□□□□□ -1.93
CDC40YDR364C MEI5P32489 222 aa2.98□□□□□ -1.93
CDC40YDR364C RAD23P32628 398 aaKnown RBP2.98□□□□□ -1.93
CDC40YDR364C CAT2P32796 670 aaKnown RBP2.98□□□□□ -1.93
CDC40YDR364C SFC1P33303 322 aa2.98□□□□□ -1.93
CDC40YDR364C SKN1P33336 771 aa2.98□□□□□ -1.93
CDC40YDR364C TPO5P36029 618 aa2.98□□□□□ -1.93
CDC40YDR364C DOA1P36037 715 aa2.98□□□□□ -1.93
CDC40YDR364C RSM22P36056 628 aa2.98□□□□□ -1.93
CDC40YDR364C PHD1P36093 366 aa2.98□□□□□ -1.93
CDC40YDR364C SPC34P36131 295 aa2.98□□□□□ -1.93
CDC40YDR364C SKG1P36169 355 aa2.98□□□□□ -1.93
CDC40YDR364C SCO2P38072 301 aa2.98□□□□□ -1.93
CDC40YDR364C YBR241CP38142 488 aa2.98□□□□□ -1.93
CDC40YDR364C PFS1P38872 237 aa2.98□□□□□ -1.93
CDC40YDR364C YPS6P40583 537 aa2.98□□□□□ -1.93
CDC40YDR364C AZF1P41696 914 aa2.98□□□□□ -1.93
CDC40YDR364C PMT4P46971 762 aa2.98□□□□□ -1.93
CDC40YDR364C SPO19Q03029 223 aa2.98□□□□□ -1.93
CDC40YDR364C YMR087WQ04299 284 aa2.98□□□□□ -1.93
CDC40YDR364C URC2Q04411 772 aa2.98□□□□□ -1.93
CDC40YDR364C YMR226CQ05016 267 aaKnown RBP2.98□□□□□ -1.93
CDC40YDR364C BUR2Q05949 395 aa2.98□□□□□ -1.93
CDC40YDR364C SYO1Q07395 620 aa2.98□□□□□ -1.93
CDC40YDR364C YLR036CQ07986 203 aa2.98□□□□□ -1.93
CDC40YDR364C RRP40Q08285 240 aaKnown RBP2.98□□□□□ -1.93
CDC40YDR364C SRO7Q12038 1033 aa2.98□□□□□ -1.93
CDC40YDR364C YLR112WQ12130 139 aa2.98□□□□□ -1.93
CDC40YDR364C YOL107WQ12239 342 aa2.98□□□□□ -1.93
CDC40YDR364C DCP1Q12517 231 aaPredicted RBP2.98□□□□□ -1.93
CDC40YDR364C MSB2P32334 1306 aa2.97□□□□□ -1.93
CDC40YDR364C SSA3P09435 649 aaKnown RBP2.97□□□□□ -1.93
CDC40YDR364C ATR1P13090 542 aa2.97□□□□□ -1.93
CDC40YDR364C CMK2P22517 447 aa2.97□□□□□ -1.93
CDC40YDR364C MGR1P25573 417 aa2.97□□□□□ -1.93
CDC40YDR364C NUP2P32499 720 aa2.97□□□□□ -1.93
CDC40YDR364C SSO1P32867 290 aa2.97□□□□□ -1.93
CDC40YDR364C PDR3P33200 976 aa2.97□□□□□ -1.93
CDC40YDR364C YNK1P36010 153 aaKnown RBP2.97□□□□□ -1.93
CDC40YDR364C YCR041WP37265 110 aa2.97□□□□□ -1.93
CDC40YDR364C YMR262WP38430 313 aa2.97□□□□□ -1.93
CDC40YDR364C RCK1P38622 512 aa2.97□□□□□ -1.93
CDC40YDR364C YAL037WP39728 267 aa2.97□□□□□ -1.93
CDC40YDR364C RBG1P39729 369 aa2.97□□□□□ -1.93
CDC40YDR364C THO1P40040 218 aaKnown RBP2.97□□□□□ -1.93
CDC40YDR364C PDS1P40316 373 aaPredicted RBP2.97□□□□□ -1.93
CDC40YDR364C SPG5P42933 373 aa2.97□□□□□ -1.93
CDC40YDR364C BIO3P50277 480 aa2.97□□□□□ -1.93
CDC40YDR364C SWS2P53937 143 aa2.97□□□□□ -1.93
CDC40YDR364C GPI15P53961 229 aa2.97□□□□□ -1.93
CDC40YDR364C RPL15BP54780 204 aaPredicted RBP2.97□□□□□ -1.93
CDC40YDR364C RHO3Q00245 231 aaKnown RBP2.97□□□□□ -1.93
CDC40YDR364C TRM82Q03774 444 aa2.97□□□□□ -1.93
CDC40YDR364C SMP3Q04174 516 aa2.97□□□□□ -1.93
CDC40YDR364C ATG38Q05789 226 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms