RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W VPS52P39904 641 aa4.15□□□□□ -1.75
KIN28YDL108W DDI1P40087 428 aa4.15□□□□□ -1.75
KIN28YDL108W COG3P40094 801 aa4.15□□□□□ -1.75
KIN28YDL108W SNM1P40993 198 aa4.15□□□□□ -1.75
KIN28YDL108W FMP32P43557 207 aa4.15□□□□□ -1.75
KIN28YDL108W ATG27P46989 271 aa4.15□□□□□ -1.75
KIN28YDL108W JHD2P47156 728 aaPredicted RBP4.15□□□□□ -1.75
KIN28YDL108W LYS20P48570 428 aaKnown RBP4.15□□□□□ -1.75
KIN28YDL108W BRR6P53062 197 aa4.15□□□□□ -1.75
KIN28YDL108W ALG13P53178 202 aa4.15□□□□□ -1.75
KIN28YDL108W NRK1P53915 240 aa4.15□□□□□ -1.75
KIN28YDL108W SAE3P89114 91 aa4.15□□□□□ -1.75
KIN28YDL108W YPL068CQ02749 293 aa4.15□□□□□ -1.75
KIN28YDL108W TDA1Q03533 586 aa4.15□□□□□ -1.75
KIN28YDL108W PLP1Q04004 230 aa4.15□□□□□ -1.75
KIN28YDL108W CAC2Q04199 468 aa4.15□□□□□ -1.75
KIN28YDL108W PRM6Q04705 352 aa4.15□□□□□ -1.75
KIN28YDL108W DPP1Q05521 289 aa4.15□□□□□ -1.75
KIN28YDL108W GRX8Q05926 109 aa4.15□□□□□ -1.75
KIN28YDL108W TEN1Q07921 160 aa4.15□□□□□ -1.75
KIN28YDL108W LDS2Q08218 356 aa4.15□□□□□ -1.75
KIN28YDL108W USB1Q12208 290 aaKnown RBP4.15□□□□□ -1.75
KIN28YDL108W TPO4Q12256 659 aa4.15□□□□□ -1.75
KIN28YDL108W TRM732Q03496 1420 aa4.14□□□□□ -1.75
KIN28YDL108W OPI3P05375 206 aa4.14□□□□□ -1.75
KIN28YDL108W COR1P07256 457 aa4.14□□□□□ -1.75
KIN28YDL108W YER190C-BP0CX94 160 aa4.14□□□□□ -1.75
KIN28YDL108W YEL077W-AP0CX95 160 aa4.14□□□□□ -1.75
KIN28YDL108W YGR296C-BP0CX96 160 aa4.14□□□□□ -1.75
KIN28YDL108W YPL283W-BP0CX97 160 aa4.14□□□□□ -1.75
KIN28YDL108W YPR204C-AP0CX98 160 aa4.14□□□□□ -1.75
KIN28YDL108W NSP1P14907 823 aaKnown RBP4.14□□□□□ -1.75
KIN28YDL108W CTA1P15202 515 aa4.14□□□□□ -1.75
KIN28YDL108W ELO2P25358 347 aa4.14□□□□□ -1.75
KIN28YDL108W DCC1P25559 380 aa4.14□□□□□ -1.75
KIN28YDL108W MXR2P25566 168 aa4.14□□□□□ -1.75
KIN28YDL108W FUN26P31381 517 aa4.14□□□□□ -1.75
KIN28YDL108W SOR1P35497 357 aaKnown RBP4.14□□□□□ -1.75
KIN28YDL108W JEN1P36035 616 aa4.14□□□□□ -1.75
KIN28YDL108W GRE3P38715 327 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
KIN28YDL108W MBB1P39534 108 aa4.14□□□□□ -1.75
KIN28YDL108W RBG1P39729 369 aa4.14□□□□□ -1.75
KIN28YDL108W ISC1P40015 477 aaKnown RBP4.14□□□□□ -1.75
KIN28YDL108W GPI14P47088 403 aaKnown RBP4.14□□□□□ -1.75
KIN28YDL108W NBP1P52919 319 aaPredicted RBP4.14□□□□□ -1.75
KIN28YDL108W CPD1P53314 239 aa4.14□□□□□ -1.75
KIN28YDL108W RPL15BP54780 204 aaPredicted RBP4.14□□□□□ -1.75
KIN28YDL108W YPL113CQ02961 396 aa4.14□□□□□ -1.75
KIN28YDL108W HER2Q03557 464 aa4.14□□□□□ -1.75
KIN28YDL108W SDH7Q04401 133 aa4.14□□□□□ -1.75
KIN28YDL108W YML096WQ04489 525 aa4.14□□□□□ -1.75
KIN28YDL108W BNA5Q05979 453 aa4.14□□□□□ -1.75
KIN28YDL108W NOC4Q06512 552 aaPredicted RBP4.14□□□□□ -1.75
KIN28YDL108W CTR3Q06686 241 aa4.14□□□□□ -1.75
KIN28YDL108W ASR1Q06834 288 aa4.14□□□□□ -1.75
KIN28YDL108W SOR2Q07786 357 aa4.14□□□□□ -1.75
KIN28YDL108W ATX2Q12067 313 aa4.14□□□□□ -1.75
KIN28YDL108W YPR022CQ12139 1133 aa4.14□□□□□ -1.75
KIN28YDL108W DCN1Q12395 269 aa4.14□□□□□ -1.75
KIN28YDL108W YOP1Q12402 180 aa4.14□□□□□ -1.75
KIN28YDL108W YDL199CQ12407 687 aa4.14□□□□□ -1.75
KIN28YDL108W TRM3Q07527 1436 aa4.13□□□□□ -1.75
KIN28YDL108W RPO31P04051 1460 aa4.13□□□□□ -1.75
KIN28YDL108W YOR304C-AO14468 76 aa4.13□□□□□ -1.75
KIN28YDL108W IMA3P0CW40 589 aa4.13□□□□□ -1.75
KIN28YDL108W IMA4P0CW41 589 aa4.13□□□□□ -1.75
KIN28YDL108W ERD1P16151 362 aa4.13□□□□□ -1.75
KIN28YDL108W EPT1P22140 391 aa4.13□□□□□ -1.75
KIN28YDL108W RPS1BP23248 255 aaKnown RBP4.13□□□□□ -1.75
KIN28YDL108W ATO2P32907 282 aa4.13□□□□□ -1.75
KIN28YDL108W BNA4P38169 460 aa4.13□□□□□ -1.75
KIN28YDL108W DBP8P38719 431 aa4.13□□□□□ -1.75
KIN28YDL108W CIN4P39110 191 aa4.13□□□□□ -1.75
KIN28YDL108W YER076CP40049 302 aa4.13□□□□□ -1.75
KIN28YDL108W CTK3P46963 296 aaPredicted RBP4.13□□□□□ -1.75
KIN28YDL108W ILM1P47155 203 aa4.13□□□□□ -1.75
KIN28YDL108W MIC26P50087 233 aa4.13□□□□□ -1.75
KIN28YDL108W UFD1P53044 361 aa4.13□□□□□ -1.75
KIN28YDL108W BOR1P53838 576 aa4.13□□□□□ -1.75
KIN28YDL108W UBC7Q02159 165 aa4.13□□□□□ -1.75
KIN28YDL108W RNY1Q02933 434 aaKnown RBP4.13□□□□□ -1.75
KIN28YDL108W SEC13Q04491 297 aaKnown RBP4.13□□□□□ -1.75
KIN28YDL108W NAT4Q04751 285 aa4.13□□□□□ -1.75
KIN28YDL108W YMR034CQ05131 434 aaPredicted RBP4.13□□□□□ -1.75
KIN28YDL108W IMA2Q08295 589 aa4.13□□□□□ -1.75
KIN28YDL108W YLR112WQ12130 139 aa4.13□□□□□ -1.75
KIN28YDL108W YLR050CQ12155 161 aaKnown RBP4.13□□□□□ -1.75
KIN28YDL108W ICT1Q12385 394 aa4.13□□□□□ -1.75
KIN28YDL108W RDI1Q12434 202 aa4.13□□□□□ -1.75
KIN28YDL108W EDE1P34216 1381 aa4.13□□□□□ -1.75
KIN28YDL108W REV3P14284 1504 aa4.12□□□□□ -1.75
KIN28YDL108W TPK3P05986 398 aa4.12□□□□□ -1.75
KIN28YDL108W RPL20AP0CX23 172 aaKnown RBP4.12□□□□□ -1.75
KIN28YDL108W RPL20BP0CX24 172 aaPredicted RBP4.12□□□□□ -1.75
KIN28YDL108W SEC14P24280 304 aaKnown RBP4.12□□□□□ -1.75
KIN28YDL108W TRX3P25372 127 aa4.12□□□□□ -1.75
KIN28YDL108W RSA4P25382 515 aaKnown RBP4.12□□□□□ -1.75
KIN28YDL108W HOM6P31116 359 aaKnown RBP4.12□□□□□ -1.75
KIN28YDL108W SPS18P32572 300 aa4.12□□□□□ -1.75
KIN28YDL108W ZRT1P32804 376 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 272.8 ms