RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C HYM1P32464 399 aa1.21□□□□□ -2.22
MSH3YCR092C NUP2P32499 720 aa1.21□□□□□ -2.22
MSH3YCR092C MRPL6P32904 214 aa1.21□□□□□ -2.22
MSH3YCR092C YBR144CP34215 104 aa1.21□□□□□ -2.22
MSH3YCR092C FMP23P38231 175 aa1.21□□□□□ -2.22
MSH3YCR092C APE4P38821 490 aa1.21□□□□□ -2.22
MSH3YCR092C SMX2P40204 77 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C MOB2P43563 287 aa1.21□□□□□ -2.22
MSH3YCR092C SSY5P47002 699 aa1.21□□□□□ -2.22
MSH3YCR092C APT1P49435 187 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C IMO32P53219 342 aa1.21□□□□□ -2.22
MSH3YCR092C MEP3P53390 489 aa1.21□□□□□ -2.22
MSH3YCR092C SMX3P54999 86 aaPredicted RBP1.21□□□□□ -2.22
MSH3YCR092C DIG1Q03063 452 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C RSC9Q03124 581 aa1.21□□□□□ -2.22
MSH3YCR092C HMO1Q03973 246 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C GEP3Q08622 556 aa1.21□□□□□ -2.22
MSH3YCR092C THP3Q12049 470 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C PSF1Q12488 208 aa1.21□□□□□ -2.22
MSH3YCR092C MSW1P04803 379 aa1.21□□□□□ -2.22
MSH3YCR092C RPC40P07703 335 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C ERG4P25340 473 aa1.21□□□□□ -2.22
MSH3YCR092C ITR2P30606 609 aa1.21□□□□□ -2.22
MSH3YCR092C MCM10P32354 571 aa1.21□□□□□ -2.22
MSH3YCR092C CLB6P32943 380 aa1.21□□□□□ -2.22
MSH3YCR092C RIX1P38883 763 aaPredicted RBP1.21□□□□□ -2.22
MSH3YCR092C IES5P40060 125 aa1.21□□□□□ -2.22
MSH3YCR092C PDS1P40316 373 aaPredicted RBP1.21□□□□□ -2.22
MSH3YCR092C PEP8P40335 379 aa1.21□□□□□ -2.22
MSH3YCR092C UBP6P43593 499 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C LSM1P47017 172 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C YGR042WP53227 271 aa1.21□□□□□ -2.22
MSH3YCR092C EAF7P53911 425 aaKnown RBP1.21□□□□□ -2.22
MSH3YCR092C YMR155WQ03795 547 aa1.21□□□□□ -2.22
MSH3YCR092C SPO77Q06134 477 aa1.21□□□□□ -2.22
MSH3YCR092C SNA4Q07549 140 aa1.21□□□□□ -2.22
MSH3YCR092C DGK1Q12382 290 aa1.21□□□□□ -2.22
MSH3YCR092C YPR064WQ12492 139 aa1.21□□□□□ -2.22
MSH3YCR092C RIB3Q99258 208 aa1.21□□□□□ -2.22
MSH3YCR092C CDC28P00546 298 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C MATALPHA1P0CY06 175 aa1.2□□□□□ -2.22
MSH3YCR092C HMLALPHA1P0CY07 175 aa1.2□□□□□ -2.22
MSH3YCR092C ARF1P11076 181 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C ZWF1P11412 505 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C CTA1P15202 515 aa1.2□□□□□ -2.22
MSH3YCR092C CDC23P16522 626 aa1.2□□□□□ -2.22
MSH3YCR092C PHO85P17157 305 aa1.2□□□□□ -2.22
MSH3YCR092C YMR31P19955 123 aa1.2□□□□□ -2.22
MSH3YCR092C FAR1P21268 830 aa1.2□□□□□ -2.22
MSH3YCR092C SAN1P22470 610 aa1.2□□□□□ -2.22
MSH3YCR092C OCH1P31755 480 aa1.2□□□□□ -2.22
MSH3YCR092C PRP19P32523 503 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C MIC12P38341 106 aa1.2□□□□□ -2.22
MSH3YCR092C EFM1P38732 585 aa1.2□□□□□ -2.22
MSH3YCR092C NOP16P40007 231 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C BMT5P40493 336 aa1.2□□□□□ -2.22
MSH3YCR092C GLR1P41921 483 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C YFL051CP43552 160 aa1.2□□□□□ -2.22
MSH3YCR092C BAT2P47176 376 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C YJR154WP47181 346 aa1.2□□□□□ -2.22
MSH3YCR092C BUL1P48524 976 aa1.2□□□□□ -2.22
MSH3YCR092C ERG26P53199 349 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C SNF12P53628 566 aa1.2□□□□□ -2.22
MSH3YCR092C HOT1Q03213 719 aa1.2□□□□□ -2.22
MSH3YCR092C YMR114CQ04471 368 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C SEI1Q06058 285 aa1.2□□□□□ -2.22
MSH3YCR092C YET3Q07451 203 aa1.2□□□□□ -2.22
MSH3YCR092C GAT3Q07928 141 aa1.2□□□□□ -2.22
MSH3YCR092C THP1Q08231 455 aa1.2□□□□□ -2.22
MSH3YCR092C PRM3Q08931 133 aa1.2□□□□□ -2.22
MSH3YCR092C BAG7Q12128 409 aa1.2□□□□□ -2.22
MSH3YCR092C ORT1Q12375 292 aa1.2□□□□□ -2.22
MSH3YCR092C YPL229WQ99395 206 aa1.2□□□□□ -2.22
MSH3YCR092C GAL1P04385 528 aa1.2□□□□□ -2.22
MSH3YCR092C TPK3P05986 398 aa1.2□□□□□ -2.22
MSH3YCR092C YER190C-BP0CX94 160 aa1.2□□□□□ -2.22
MSH3YCR092C YEL077W-AP0CX95 160 aa1.2□□□□□ -2.22
MSH3YCR092C YGR296C-BP0CX96 160 aa1.2□□□□□ -2.22
MSH3YCR092C YPL283W-BP0CX97 160 aa1.2□□□□□ -2.22
MSH3YCR092C YPR204C-AP0CX98 160 aa1.2□□□□□ -2.22
MSH3YCR092C YFL068WP0CX99 160 aa1.2□□□□□ -2.22
MSH3YCR092C YLL066W-AP0CY00 160 aa1.2□□□□□ -2.22
MSH3YCR092C YLL067W-AP0CY01 160 aa1.2□□□□□ -2.22
MSH3YCR092C CBF1P17106 351 aa1.2□□□□□ -2.22
MSH3YCR092C NRP1P32770 719 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
MSH3YCR092C PTR2P32901 601 aa1.2□□□□□ -2.22
MSH3YCR092C PTH2P34222 208 aa1.2□□□□□ -2.22
MSH3YCR092C ANR2P36090 516 aaPredicted RBP1.2□□□□□ -2.22
MSH3YCR092C APL3P38065 1025 aa1.2□□□□□ -2.22
MSH3YCR092C MED8P38304 223 aa1.2□□□□□ -2.22
MSH3YCR092C YJL206CP39529 758 aa1.2□□□□□ -2.22
MSH3YCR092C URM1P40554 99 aaPredicted RBP1.2□□□□□ -2.22
MSH3YCR092C YGL204CP53089 101 aa1.2□□□□□ -2.22
MSH3YCR092C YGR126WP53274 230 aa1.2□□□□□ -2.22
MSH3YCR092C CUS2P53830 285 aaPredicted RBP1.2□□□□□ -2.22
MSH3YCR092C SAM50P53969 484 aa1.2□□□□□ -2.22
MSH3YCR092C MSC1Q03104 513 aa1.2□□□□□ -2.22
MSH3YCR092C NDL1Q06568 189 aa1.2□□□□□ -2.22
MSH3YCR092C YRA1Q12159 226 aaKnown RBP1.2□□□□□ -2.22
MSH3YCR092C NPC2Q12408 173 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms