RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SMPD1P17405 629 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 MARK3P27448 753 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 KLK7P49862 253 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 CLDN10P78369 228 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 CYP24A1Q07973 514 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 LAMTOR4Q0VGL1 99 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 PSMD6Q15008 389 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 ARHGEF6Q15052 776 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 EFCAB12Q6NXP0 572 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 TRIM65Q6PJ69 517 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 TOGARAM2Q6ZUX3 1019 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 KIAA1328Q86T90 577 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 KSR1Q8IVT5 923 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 PARD3BQ8TEW8 1205 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 PRPF31Q8WWY3 499 aaKnown RBP10.56□□□□□ -0.72
PHGDH-215ENST00000641371 COPS5Q92905 334 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 JAKMIP2Q96AA8 810 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
PHGDH-215ENST00000641371 FNBP1Q96RU3 617 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 PCIF1Q9H4Z3 704 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 SPC25Q9HBM1 224 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 GNEQ9Y223 722 aaKnown RBP10.56□□□□□ -0.72
PHGDH-215ENST00000641371 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
PHGDH-215ENST00000641371 A0A0B4J269 797 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 USP27XA6NNY8 438 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 ZBTB42B2RXF5 422 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 RBAK-RBAKDNI3L0D1 243 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 CLDN3O15551 220 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 C22orf31O95567 290 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 F2P00734 622 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 GNRH1P01148 92 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 PRKCBP05771 671 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 AKR1A1P14550 325 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 INSRRP14616 1297 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 HOXD10P28358 340 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 ADSSP30520 456 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 KIF11P52732 1056 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 VAV2P52735 878 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 PTENP60484 403 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 TUBB4BP68371 445 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 NCBP1Q09161 790 aaKnown RBP10.55□□□□□ -0.72
PHGDH-215ENST00000641371 KLHL30Q0D2K2 578 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 KIF5AQ12840 1032 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 CRHR2Q13324 411 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 RAPGEF1Q13905 1077 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 EPC2Q52LR7 807 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 TDRD12Q587J7 1177 aaKnown RBP10.55□□□□□ -0.72
PHGDH-215ENST00000641371 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 SRGAP1Q7Z6B7 1085 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 TRIM50Q86XT4 487 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 RNF149Q8NC42 400 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
PHGDH-215ENST00000641371 CHP1Q99653 195 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 CRACR2AQ9BSW2 395 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 KIFC3Q9BVG8 833 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-215ENST00000641371 INTS2Q9H0H0 1204 aaKnown RBP10.55□□□□□ -0.72
PHGDH-215ENST00000641371 CCDC113Q9H0I3 377 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 FZD8Q9H461 694 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 SUGCTQ9HAC7 445 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 R3HCC1Q9Y3T6 440 aaKnown RBP10.55□□□□□ -0.72
PHGDH-215ENST00000641371 TELO2Q9Y4R8 837 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 EVPLQ92817 2033 aa10.55□□□□□ -0.72
PHGDH-215ENST00000641371 ANKRD63C9JTQ0 380 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 RNF225M0QZC1 329 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 OGTO15294 1046 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 MSCO60682 206 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 DUSP11O75319 330 aaKnown RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 IGHA2P01877 340 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 ZNF865P0CJ78 1059 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 SLC9A1P19634 815 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 KLRC1P26715 233 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 CASQ1P31415 396 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 SOX5P35711 763 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 MATR3P43243 847 aaKnown RBP eCLIP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 GPC3P51654 580 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 MFAP3P55082 362 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 JAM2P57087 298 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 MCL1Q07820 350 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 SLC18A3Q16572 532 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 IFI16Q16666 785 aaKnown RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 SLC39A4Q6P5W5 647 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 TSHZ1Q6ZSZ6 1077 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 LINC01465Q8N7H1 131 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 RDH13Q8NBN7 331 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 FBXL13Q8NEE6 735 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 FAXDC2Q96IV6 333 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
PHGDH-215ENST00000641371 MSTO1Q9BUK6 570 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 IFIH1Q9BYX4 1025 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms