RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 KLHL7Q8IXQ5 586 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 XPNPEP1Q9NQW7 623 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 SEPT9Q9UHD8 586 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-211ENST00000641213 NOC2LQ9Y3T9 749 aaKnown RBP18.46■□□□□ 0.55
PHGDH-211ENST00000641213 PPP2R3BQ9Y5P8 575 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 SIP14410 1827 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 ESYT3A0FGR9 886 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 FAM170AA1A519 330 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 SORBS3O60504 671 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 PRKCEQ02156 737 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 MCPH1Q8NEM0 835 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 SEMA4DQ92854 862 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 CCDC127Q96BQ5 260 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 CALR3Q96L12 384 aaKnown RBP18.45■□□□□ 0.54
PHGDH-211ENST00000641213 MFSD14AQ96MC6 490 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 FBXL18Q96ME1 805 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 CYP26B1Q9NR63 512 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 NFU1Q9UMS0 254 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 OTOFQ9HC10 1997 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 MYPNQ86TC9 1320 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 SBF1O95248 1867 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 LMAN1P49257 510 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 RTP1P59025 263 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 NNTQ13423 1086 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 PRKG1Q13976 671 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 GNPTABQ3T906 1256 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 KRT39Q6A163 491 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 TSEN2Q8NCE0 465 aaKnown RBP18.45■□□□□ 0.54
PHGDH-211ENST00000641213 CASKIN2Q8WXE0 1202 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 IFT81Q8WYA0 676 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 KREMEN1Q96MU8 473 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 POP1Q99575 1024 aaKnown RBP18.45■□□□□ 0.54
PHGDH-211ENST00000641213 MAF1Q9H063 256 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 FAM204AQ9H8W3 233 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■■ 90
PHGDH-211ENST00000641213 COG5Q9UP83 839 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 COQ4Q9Y3A0 265 aa18.45■□□□□ 0.54
PHGDH-211ENST00000641213 A0A0G2JMZ2 1700 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 USP8P40818 1118 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 SP2Q02086 613 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 PAK2Q13177 524 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 FAM71AQ8IYT1 594 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 RPUSD2Q8IZ73 545 aaKnown RBP18.44■□□□□ 0.54
PHGDH-211ENST00000641213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.542e-7■■□□□ 13.6
PHGDH-211ENST00000641213 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 POMGNT1Q8WZA1 660 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 AP1M1Q9BXS5 423 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 ISCUQ9H1K1 167 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 ATP6V0A4Q9HBG4 840 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 TMEM8AQ9HCN3 771 aa18.44■□□□□ 0.54
PHGDH-211ENST00000641213 SGPL1O95470 568 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 R3HDM1Q15032 1099 aaKnown RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 SUPT20HL1Q3ZLR7 823 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 SH3D19Q5HYK7 790 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 MIS18BP1Q6P0N0 1132 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 PPM1KQ8N3J5 372 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 NLGN2Q8NFZ4 835 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 PAPPA2Q9BXP8 1791 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 DDX3YO15523 660 aaKnown RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 USP2O75604 605 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 FTLP02792 175 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 FAM153BP0C7A2 387 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 SUPT20HL2P0C7V6 817 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 CHRNB2P17787 502 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 GPC3P51654 580 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 MFAP3P55082 362 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 HADHBP55084 474 aaKnown RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 CYP24A1Q07973 514 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 TRADDQ15628 312 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 FAM153CQ494X1 144 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 TAS1R3Q7RTX0 852 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 RHOT2Q8IXI1 618 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 EPS8L1Q8TE68 723 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 SHC3Q92529 594 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 POLR3FQ9H1D9 316 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 TOPORSQ9NS56 1045 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 FAM153AQ9UHL3 310 aa18.43■□□□□ 0.54
PHGDH-211ENST00000641213 NOCTQ9UK39 431 aaKnown RBP18.43■□□□□ 0.54
PHGDH-211ENST00000641213 CCDC188H7C350 402 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 KRIT1O00522 736 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 HNRNPDLO14979 420 aaKnown RBP18.42■□□□□ 0.54
PHGDH-211ENST00000641213 BRDTQ58F21 947 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-211ENST00000641213 XKR3Q5GH77 459 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 NOP9Q86U38 636 aaKnown RBP18.42■□□□□ 0.54
PHGDH-211ENST00000641213 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 GPC2Q8N158 579 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 GPD1LQ8N335 351 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 PCDHB18PQ96TA0 734 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 ARHGAP28Q9P2N2 729 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 CYP26A1O43174 497 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 RTN2O75298 545 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 GARTP22102 1010 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 CNTN2Q02246 1040 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 FSTL1Q12841 308 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 TCEAL1Q15170 157 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 STXBP2Q15833 593 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 MTERF2Q49AM1 385 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 DCAF12L1Q5VU92 463 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms