RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 DRC7Q8IY82 874 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 KCTD17Q8N5Z5 321 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 ADAM2Q99965 735 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 RGS18Q9NS28 235 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 EXOC1Q9NV70 894 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 ST3GAL5Q9UNP4 418 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 PLXNA4Q9HCM2 1894 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 MYMKA6NI61 221 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 GAS7O60861 476 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 MED24O75448 989 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 PSMD10O75832 226 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 C22orf31O95567 290 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 RPA1P27694 616 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 FANCCQ00597 558 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 PPP2R5CQ13362 524 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 ECM1Q16610 540 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 SPATA1Q5VX52 437 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 SLC24A5Q71RS6 500 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 EDAQ92838 391 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 KIAA1024Q9UPX6 916 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 PCDHB7Q9Y5E2 793 aa13.11□□□□□ -0.31
ERGIC3-220ENST00000640748 COL1A2P08123 1366 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 BACH1O14867 736 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FSCN2O14926 492 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 PER2O15055 1255 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 GPR32O75388 356 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FGFR1P11362 822 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 ERVFC1P60507 584 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FAM189BP81408 668 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 PAK1Q13153 545 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 KCNC3Q14003 757 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 DSC3Q14574 896 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 KIZQ2M2Z5 673 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 ZNF484Q5JVG2 852 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 SWSAP1Q6NVH7 229 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FAM43BQ6ZT52 329 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 KCNK18Q7Z418 384 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 SMYD4Q8IYR2 804 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 SUSD6Q92537 303 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 PPP2R3CQ969Q6 453 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 PPP1R16BQ96T49 567 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 RIT2Q99578 217 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 EIF2AK1Q9BQI3 630 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 CWH43Q9H720 699 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 TLE6Q9H808 572 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 ZNF302Q9NR11 478 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 C1orf112Q9NSG2 853 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 GDAQ9Y2T3 454 aa13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-220ENST00000640748 E9PMD0 336 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 FGF18O76093 207 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 SERPINC1P01008 464 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 PLA2G4BP0C869 781 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 MUTP22033 750 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 CRYBB1P53674 252 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 STX17P56962 302 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 UBE3AQ05086 875 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 PSMD2Q13200 908 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 EPHA7Q15375 998 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 DUSP6Q16828 381 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 LRRC55Q6ZSA7 311 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 BMP8AQ7Z5Y6 402 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
ERGIC3-220ENST00000640748 COLGALT1Q8NBJ5 622 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms