RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 CATSPER4Q7RTX7 472 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 FAM126BQ8IXS8 530 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ANKRD20A12PQ8NF67 263 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 POMGNT1Q8WZA1 660 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 DHX38Q92620 1227 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 PAWRQ96IZ0 340 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ZBTB45Q96K62 511 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 CEP63Q96MT8 703 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ACO2Q99798 780 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 CBWD1Q9BRT8 395 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 HSD3B7Q9H2F3 369 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ANKFY1Q9P2R3 1169 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 MROH7Q68CQ1 1323 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 GOLGA8IPA6NC78 632 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 GOLGA8JA6NMD2 632 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 DCDC2CA8MYV0 355 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TULP1O00294 542 aaPredicted RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CLDN3O15551 220 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TSPAN1O60635 241 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TOM1L1O75674 476 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 GNA14O95837 355 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 SERPINC1P01008 464 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 EPB41P11171 864 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 HARSP12081 509 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CKBP12277 381 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 GARTP22102 1010 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 SFPQP23246 707 aaKnown RBP eCLIP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 ADSSP30520 456 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 PSMC2P35998 433 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 MTIF2P46199 727 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TLE2Q04725 743 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 SPAG1Q07617 926 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 MGAT3Q09327 533 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 MYBPC2Q14324 1141 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 AMHR2Q16671 573 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TRIM60Q495X7 471 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CCDC40Q4G0X9 1142 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 ZNF618Q5T7W0 954 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 ATF7IP2Q5U623 682 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TSHZ1Q6ZSZ6 1077 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 NECAB2Q7Z6G3 386 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 ZBTB33Q86T24 672 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 IRF2BP1Q8IU81 584 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 SLC9A9Q8IVB4 645 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 C12orf56Q8IXR9 622 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 ZC3H3Q8IXZ2 948 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CCDC155Q8N6L0 562 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 XXYLT1Q8NBI6 393 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 RDH13Q8NBN7 331 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 TMEM40Q8WWA1 233 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CPB2Q96IY4 423 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CNOT6LQ96LI5 555 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 PRIMPOLQ96LW4 560 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 MSTO1Q9BUK6 570 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 DMAC2Q9NW81 257 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 HSPBP1Q9NZL4 362 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 ATP11BQ9Y2G3 1177 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 FRMD4BQ9Y2L6 1034 aa9.58□□□□□ -0.88
HLA-B-258ENST00000640615 NOC2LQ9Y3T9 749 aaKnown RBP9.58□□□□□ -0.88
HLA-B-258ENST00000640615 CNTNAP2Q9UHC6 1331 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 FRMPD3Q5JV73 1810 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 N4BP3O15049 544 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 SLC16A3O15427 465 aaKnown RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 CAND2O75155 1236 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 RPS6KA5O75582 802 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 AKAP3O75969 853 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 CD4P01730 458 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 TPM2P07951 284 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 ARF4P18085 180 aaPredicted RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 EEF1GP26641 437 aaKnown RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 CASP4P49662 377 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 FANCCQ00597 558 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 NFX1Q12986 1120 aaKnown RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 BFSP2Q13515 415 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 KRT31Q15323 416 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 PCBP1Q15365 356 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■■□□□ 14.3
HLA-B-258ENST00000640615 ZNF568Q3ZCX4 644 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 FAM26DQ5JW98 314 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 EEF1DP3Q658K8 133 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 MPZL3Q6UWV2 235 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 ANKRD33Q7Z3H0 272 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 CDR2LQ86X02 465 aaPredicted RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 FAM186BQ8IYM0 893 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 GPD1LQ8N335 351 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 ZSWIM2Q8NEG5 633 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 CAGE1Q8TC20 777 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 SAAL1Q96ER3 474 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 FAM213AQ9BRX8 229 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 TRIM5Q9C035 493 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 ARMCX3Q9UH62 379 aaPredicted RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 LIMA1Q9UHB6 759 aaKnown RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 AGO2Q9UKV8 859 aaKnown RBP9.57□□□□□ -0.88
HLA-B-258ENST00000640615 TNFSF13BQ9Y275 285 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 STYXL1Q9Y6J8 313 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 CEP290O15078 2479 aa9.57□□□□□ -0.88
HLA-B-258ENST00000640615 A0A0B4J269 797 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms