RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 C11orf16Q9NQ32 467 aa17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 PRMT7Q9NVM4 692 aaPredicted RBP17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 DNAJB4Q9UDY4 337 aa17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 FAN1Q9Y2M0 1017 aa17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
PTPRVP-204ENST00000639439 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 PRR33A8MZF0 331 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 DDHD2O94830 711 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 POMCP01189 267 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 CDCA2Q69YH5 1023 aaPredicted RBP17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 LLGL2Q6P1M3 1020 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 SLC27A1Q6PCB7 646 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 S1PR5Q9H228 398 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 HCFC2Q9Y5Z7 792 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 ZMYM2Q9UBW7 1377 aa17.22■□□□□ 0.35
PTPRVP-204ENST00000639439 A0A1B0GUA9 196 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 ARL5CA6NH57 179 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 LOC730098B7Z3J9 87 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 NR1I2O75469 434 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 AFF1P51825 1210 aaKnown RBP17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 PTGDRQ13258 359 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 NBR1Q14596 966 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 CBX2Q14781 532 aaPredicted RBP17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 PPP2R5AQ15172 486 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 HERC4Q5GLZ8 1057 aaPredicted RBP17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 SYCE2Q6PIF2 218 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 RNF135Q8IUD6 432 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 BCL7CQ8WUZ0 217 aaPredicted RBP17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 GAD1Q99259 594 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 FZD8Q9H461 694 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 HCN4Q9Y3Q4 1203 aa17.21■□□□□ 0.35
PTPRVP-204ENST00000639439 FAM86C2PA6NEL3 165 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 NRP1O14786 923 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 B4GALT5O43286 388 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 B4GALT3O60512 393 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 MLH1P40692 756 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 PRPHP41219 470 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 NAMPTP43490 491 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 ITIH3Q06033 890 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 MAPK6Q16659 721 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 RILPL1Q5EBL4 403 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 CES5AQ6NT32 575 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 NECTIN4Q96NY8 510 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 EMILIN2Q9BXX0 1053 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 ARIH1Q9Y4X5 557 aaPredicted RBP17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 HES2Q9Y543 173 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
PTPRVP-204ENST00000639439 C5orf42Q9H799 3197 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 N4BP3O15049 544 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 NPTXRO95502 500 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 DSC1Q08554 894 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 MCTP1Q6DN14 999 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 COLGALT2Q8IYK4 626 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 AUTS2Q8WXX7 1259 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 APOL6Q9BWW8 343 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 VN1R3Q9BXE9 311 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 ADAM7Q9H2U9 754 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 NXF3Q9H4D5 531 aaKnown RBP17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 KIAA1024Q9UPX6 916 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 SSX2IPQ9Y2D8 614 aa17.19■□□□□ 0.34
PTPRVP-204ENST00000639439 H3BQV1 296 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 ACKR2O00590 384 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 SOD2P04179 222 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 OR1G1P47890 313 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 SCNN1GP51170 649 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 EFNA5P52803 228 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 PRPF4BQ13523 1007 aaKnown RBP17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 ECM1Q16610 540 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 ZFP42Q96MM3 310 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 COLEC11Q9BWP8 271 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 MRPL17Q9NRX2 175 aaKnown RBP17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 DNM3Q9UQ16 869 aa17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 PRG3Q9Y2Y8 225 aaPredicted RBP17.18■□□□□ 0.34
PTPRVP-204ENST00000639439 PRKCBP05771 671 aa17.17■□□□□ 0.34
PTPRVP-204ENST00000639439 URODP06132 367 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms