RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CCDC43Q96MW1 224 aaKnown RBP18.76■□□□□ 0.59
SMN2-216ENST00000638794 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
SMN2-216ENST00000638794 FAN1Q9Y2M0 1017 aa18.76■□□□□ 0.59
SMN2-216ENST00000638794 USP34Q70CQ2 3546 aa18.76■□□□□ 0.59
SMN2-216ENST00000638794 A0A087WWV3 80 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 ARL2P36404 184 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 MLH1P40692 756 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 RARRES1P49788 294 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 MRE11P49959 708 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 MBTD1Q05BQ5 628 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 POU5F1BQ06416 359 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 ST3GAL1Q11201 340 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 TRIM29Q14134 588 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 AMHR2Q16671 573 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 ATAT1Q5SQI0 421 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 CABP7Q86V35 215 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 PPFIBP1Q86W92 1011 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 KREMEN2Q8NCW0 462 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 PIGOQ8TEQ8 1089 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 KLHL5Q96PQ7 755 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 MTMR9Q96QG7 549 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 GAD1Q99259 594 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 UBN1Q9NPG3 1134 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 MARCH5Q9NX47 278 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 STK39Q9UEW8 545 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 PRG3Q9Y2Y8 225 aaPredicted RBP18.75■□□□□ 0.59
SMN2-216ENST00000638794 HES2Q9Y543 173 aa18.75■□□□□ 0.59
SMN2-216ENST00000638794 PLXNA3P51805 1871 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 ARL5CA6NH57 179 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 POTEMA6NI47 508 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 INPPL1O15357 1258 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 LILRB3O75022 631 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 CNPP09543 421 aaKnown RBP18.74■□□□□ 0.59
SMN2-216ENST00000638794 GLRA2P23416 452 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 VCPP55072 806 aaKnown RBP18.74■□□□□ 0.59
SMN2-216ENST00000638794 TMC5Q6UXY8 1006 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 COLGALT2Q8IYK4 626 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 ZFP42Q96MM3 310 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 EMILIN2Q9BXX0 1053 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 CSRNP2Q9H175 543 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 TMEM60Q9H2L4 133 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 DBR1Q9UK59 544 aaKnown RBP18.74■□□□□ 0.59
SMN2-216ENST00000638794 SORCS3Q9UPU3 1222 aa18.74■□□□□ 0.59
SMN2-216ENST00000638794 SOD2P04179 222 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 ARF4P18085 180 aaPredicted RBP18.73■□□□□ 0.59
SMN2-216ENST00000638794 KLRC2P26717 231 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 OR1G1P47890 313 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 SCNN1GP51170 649 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 CLCN4P51793 760 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 DSC1Q08554 894 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 NCBP1Q09161 790 aaKnown RBP18.73■□□□□ 0.59
SMN2-216ENST00000638794 MTMR3Q13615 1198 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 TDRD5Q8NAT2 981 aaKnown RBP18.73■□□□□ 0.59
SMN2-216ENST00000638794 APOL6Q9BWW8 343 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 NFKBIZQ9BYH8 718 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 POLR3FQ9H1D9 316 aaPredicted RBP18.73■□□□□ 0.59
SMN2-216ENST00000638794 NXF3Q9H4D5 531 aaKnown RBP18.73■□□□□ 0.59
SMN2-216ENST00000638794 SFXN1Q9H9B4 322 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 MRPL17Q9NRX2 175 aaKnown RBP18.73■□□□□ 0.59
SMN2-216ENST00000638794 MIOSQ9NXC5 875 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 MYO15AQ9UKN7 3530 aa18.73■□□□□ 0.59
SMN2-216ENST00000638794 C2CD2LO14523 706 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 B4GALT5O43286 388 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
SMN2-216ENST00000638794 BRD1O95696 1058 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 PDGFBP01127 241 aaPredicted RBP18.72■□□□□ 0.59
SMN2-216ENST00000638794 URODP06132 367 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 ASGR2P07307 311 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 SPATA31C1P0DKV0 1188 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 ATP2B1P20020 1258 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 PTPN5P54829 565 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 TAS1R1Q7RTX1 841 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 CDR2LQ86X02 465 aaPredicted RBP18.72■□□□□ 0.59
SMN2-216ENST00000638794 UBALD2Q8IYN6 164 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 HERC2P3Q9BVR0 1158 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 TRIM6Q9C030 488 aaPredicted RBP18.72■□□□□ 0.59
SMN2-216ENST00000638794 SMOC2Q9H3U7 446 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 USTQ9Y2C2 406 aa18.72■□□□□ 0.59
SMN2-216ENST00000638794 SPDYE4A6NLX3 237 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 F8W810 466 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 SEC24BO95487 1268 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 EFEMP2O95967 443 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 MCM7P33993 719 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 GUCY1B3Q02153 619 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 TCF15Q12870 199 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 MAEAQ7L5Y9 396 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 GPR149Q86SP6 731 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 ZDHHC14Q8IZN3 488 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 RPS6KC1Q96S38 1066 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 PHOX2BQ99453 314 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 PRRX2Q99811 253 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 GPRC5CQ9NQ84 441 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 LIMD1Q9UGP4 676 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 GIT1Q9Y2X7 761 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 CACNA1HO95180 2353 aa18.71■□□□□ 0.59
SMN2-216ENST00000638794 MED24O75448 989 aa18.7■□□□□ 0.58
SMN2-216ENST00000638794 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMN2-216ENST00000638794 AKAP5P24588 427 aa18.7■□□□□ 0.58
SMN2-216ENST00000638794 AVPR2P30518 371 aa18.7■□□□□ 0.58
SMN2-216ENST00000638794 SLC27A1Q6PCB7 646 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms