RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 OLFML3Q9NRN5 406 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 SLC38A7Q9NVC3 462 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 RAB20Q9NX57 234 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 RBAKQ9NYW8 714 aaPredicted RBP5.95□□□□□ -1.46
CHD2-227ENST00000637572 STRIP2Q9ULQ0 834 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 ITIH6Q6UXX5 1313 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 ZNF189O75820 626 aaPredicted RBP5.95□□□□□ -1.46
CHD2-227ENST00000637572 CABYRO75952 493 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 GJC1P36383 396 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 PACS2Q86VP3 889 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 AMIGO3Q86WK7 504 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 ZNF354CQ86Y25 554 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 SREK1Q8WXA9 508 aaKnown RBP5.95□□□□□ -1.46
CHD2-227ENST00000637572 WNK4Q96J92 1243 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 ACAP3Q96P50 834 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 GMLQ99445 158 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 HTATIP2Q9BUP3 242 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 TMX1Q9H3N1 280 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 ALG2Q9H553 416 aa5.95□□□□□ -1.46
CHD2-227ENST00000637572 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
CHD2-227ENST00000637572 SCAF8Q9UPN6 1271 aaKnown RBP5.95□□□□□ -1.46
CHD2-227ENST00000637572 NHSQ6T4R5 1651 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 AK9Q5TCS8 1911 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 FAM237AA0A1B0GTK4 181 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 TRAPPC3O43617 180 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 HUS1O60921 280 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 CD4P01730 458 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 AKR1A1P14550 325 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 EZRP15311 586 aaKnown RBP5.94□□□□□ -1.46
CHD2-227ENST00000637572 LMNB2Q03252 620 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GRB10Q13322 594 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 PCBP1Q15365 356 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD2-227ENST00000637572 ZNF699Q32M78 642 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GNASQ5JWF2 1037 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 KIAA1841Q6NSI8 718 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 RINT1Q6NUQ1 792 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 RBM43Q6ZSC3 357 aaKnown RBP5.94□□□□□ -1.46
CHD2-227ENST00000637572 DAAM2Q86T65 1068 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 IFT20Q8IY31 132 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 ATP8B4Q8TF62 1192 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 FAM213AQ9BRX8 229 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 SLC45A1Q9Y2W3 748 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 UTP11Q9Y3A2 253 aaKnown RBP5.94□□□□□ -1.46
CHD2-227ENST00000637572 COL2A1P02458 1487 aaPredicted RBP5.94□□□□□ -1.46
CHD2-227ENST00000637572 SYNGAP1Q96PV0 1343 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 NUP188Q5SRE5 1749 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 C17orf102A2RUQ5 167 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GOLGA6CA6NDK9 693 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GOLGA6BA6NDN3 693 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 ATG7O95352 703 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GOLGA6DP0CG33 693 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 CYP2C9P11712 490 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GARTP22102 1010 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GTF2F1P35269 517 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD2-227ENST00000637572 FAM110CQ1W6H9 321 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 Q3C1V9 767 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 C8orf74Q6P047 294 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 DSTYKQ6XUX3 929 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 SESTD1Q86VW0 696 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 TMEM35BQ8NCS4 154 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD2-227ENST00000637572 RAB17Q9H0T7 212 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 HOMER3Q9NSC5 361 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 GOLGA6AQ9NYA3 693 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 DIS3Q9Y2L1 958 aaKnown RBP5.94□□□□□ -1.46
CHD2-227ENST00000637572 ARP10275 920 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 CFAP58Q5T655 872 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 TAF2Q6P1X5 1199 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 ABRAQ8N0Z2 381 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 TPCN2Q8NHX9 752 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 FAM204AQ9H8W3 233 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.94□□□□□ -1.46
CHD2-227ENST00000637572 CYP39A1Q9NYL5 469 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 HSPBP1Q9NZL4 362 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 DNAJC12Q9UKB3 198 aa5.94□□□□□ -1.46
CHD2-227ENST00000637572 CEP104O60308 925 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 CALB1P05937 261 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MYBL1P10243 752 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ADORA2AP29274 412 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 DNAJA1P31689 397 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 GTF2H1P32780 548 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 KCNJ6P48051 423 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 NOTUMQ6P988 496 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 OTOP1Q7RTM1 612 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 BBOF1Q8ND07 529 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MORC4Q8TE76 937 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 LRRC4Q9HBW1 653 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 KCNMB3Q9NPA1 279 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MAP10Q9P2G4 905 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 SLC12A6Q9UHW9 1150 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 UBIAD1Q9Y5Z9 338 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 A0A1B0GTH6 734 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 EXTL3O43909 919 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 USP2O75604 605 aaPredicted RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 NDUFA10O95299 355 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 HSD17B4P51659 736 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 RBP5P82980 135 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TSPY1Q01534 308 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ST3GAL1Q11201 340 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms