RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 GPC4O75487 556 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 ECE1P42892 770 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 NKX1-1Q15270 411 aaPredicted RBP16.92■□□□□ 0.3
CLN5-218ENST00000637397 GRAMD1BQ3KR37 738 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 CRLF3Q8IUI8 442 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 FBXL13Q8NEE6 735 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 ATL2Q8NHH9 583 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 GRAMD1AQ96CP6 724 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 FAF2Q96CS3 445 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 OSBPL1AQ9BXW6 950 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 KYNUQ16719 465 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 FAM160B1Q5W0V3 765 aa16.92■□□□□ 0.3
CLN5-218ENST00000637397 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
CLN5-218ENST00000637397 TMEM120BA0PK00 339 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 MED7O43513 233 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 CDH16O75309 829 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 PSAPP07602 524 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 TMEM253P0C7T8 217 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 COMTP21964 271 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 KLRK1P26718 216 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 ARFIP2P53365 341 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 C7orf31Q8N865 590 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 ALG13Q9NP73 1137 aaKnown RBP16.91■□□□□ 0.3
CLN5-218ENST00000637397 STK32BQ9NY57 414 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 IVNS1ABPQ9Y6Y0 642 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 FGFR2P21802 821 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 DNAAF3Q8N9W5 541 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 DDX27Q96GQ7 796 aaKnown RBP16.91■□□□□ 0.3
CLN5-218ENST00000637397 TRPA1O75762 1119 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 SRGAP2CP0DJJ0 459 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 KITP10721 976 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 MKRN3Q13064 507 aaKnown RBP16.91■□□□□ 0.3
CLN5-218ENST00000637397 PDE1CQ14123 709 aaPredicted RBP16.91■□□□□ 0.3
CLN5-218ENST00000637397 HSP90AA5PQ58FG0 334 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 C16orf86Q6ZW13 317 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 NCAPG2Q86XI2 1143 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 DAGLBQ8NCG7 672 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 CDHR1Q96JP9 859 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 RMDN3Q96TC7 470 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 ATMINO43313 823 aaPredicted RBP16.91■□□□□ 0.3
CLN5-218ENST00000637397 STAT4Q14765 748 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 CYB5D1Q6P9G0 228 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 TRMT10CQ7L0Y3 403 aaKnown RBP16.91■□□□□ 0.3
CLN5-218ENST00000637397 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 JMJD4Q9H9V9 463 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 TMEM51Q9NW97 253 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 PCSK1NQ9UHG2 260 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 DAGLAQ9Y4D2 1042 aa16.91■□□□□ 0.3
CLN5-218ENST00000637397 WDR64B1ANS9 1081 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 ERFP50548 548 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 CEP55Q53EZ4 464 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 BARGINQ6ZT62 677 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 RFX8Q6ZV50 586 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 PDZD4Q76G19 769 aaPredicted RBP16.9■□□□□ 0.3
CLN5-218ENST00000637397 DNAAF5Q86Y56 855 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 EHD4Q9H223 541 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 CCND2P30279 289 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 THNSL1Q8IYQ7 743 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 PPM1NQ8N819 430 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 NLRP7Q8WX94 980 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 SPECC1L-ADORA2AF8WAN1 911 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 PI4K2BG5E9Z4 385 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 CFLARO15519 480 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 GNA15P30679 374 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 ARSEP51690 589 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 DCAF15Q66K64 600 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 LMBRD2Q68DH5 695 aaPredicted RBP16.9■□□□□ 0.3
CLN5-218ENST00000637397 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 WDR75Q8IWA0 830 aaKnown RBP16.9■□□□□ 0.3
CLN5-218ENST00000637397 MED10Q9BTT4 135 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 TRABDQ9H4I3 376 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 PREX1Q8TCU6 1659 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 FAM237AA0A1B0GTK4 181 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 PFDN1O60925 122 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 PPP6R3Q5H9R7 873 aaPredicted RBP16.9■□□□□ 0.3
CLN5-218ENST00000637397 PPWD1Q96BP3 646 aaKnown RBP16.9■□□□□ 0.3
CLN5-218ENST00000637397 RBM15Q96T37 977 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLN5-218ENST00000637397 TRAIPQ9BWF2 469 aa16.9■□□□□ 0.3
CLN5-218ENST00000637397 FAF1Q9UNN5 650 aaPredicted RBP16.9■□□□□ 0.3
CLN5-218ENST00000637397 GOLGA8RI6L899 631 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 KLHL38Q2WGJ6 581 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 SLFN12LQ6IEE8 588 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 DEPDC1BQ8WUY9 529 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 FAM161BQ96MY7 647 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 TTC1Q99614 292 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 KLHL11Q9NVR0 708 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 PALM3A6NDB9 673 aaPredicted RBP16.89■□□□□ 0.29
CLN5-218ENST00000637397 GSTA1P08263 222 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 GSTA2P09210 222 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 EPHA7Q15375 998 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 MCPH1Q8NEM0 835 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 FAM118BQ9BPY3 351 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 CARD9Q9H257 536 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 SMYD3Q9H7B4 428 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 PACS2Q86VP3 889 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms