RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 RPA1P27694 616 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 CCT6AP40227 531 aaKnown RBP19.86■□□□□ 0.77
PNKP-225ENST00000636214 HERC4Q5GLZ8 1057 aaPredicted RBP19.86■□□□□ 0.77
PNKP-225ENST00000636214 POTEGQ6S5H5 508 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 PPFIBP1Q86W92 1011 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 TMEM173Q86WV6 379 aaPredicted RBP19.86■□□□□ 0.77
PNKP-225ENST00000636214 ZNF280BQ86YH2 543 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 SUSD6Q92537 303 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 EMILIN2Q9BXX0 1053 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 EIF2AQ9BY44 585 aaKnown RBP19.86■□□□□ 0.77
PNKP-225ENST00000636214 C2orf40Q9H1Z8 148 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 PRMT7Q9NVM4 692 aaPredicted RBP19.86■□□□□ 0.77
PNKP-225ENST00000636214 LOC730098B7Z3J9 87 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 ARF4P18085 180 aaPredicted RBP19.85■□□□□ 0.77
PNKP-225ENST00000636214 MUTP22033 750 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 MLH1P40692 756 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 OR1G1P47890 313 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 ITIH3Q06033 890 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 KCNC3Q14003 757 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 SLC27A1Q6PCB7 646 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 SYCE2Q6PIF2 218 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 SMG8Q8ND04 991 aaKnown RBP19.85■□□□□ 0.77
PNKP-225ENST00000636214 AUTS2Q8WXX7 1259 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 PRIMPOLQ96LW4 560 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 NECTIN4Q96NY8 510 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 GIT1Q9Y2X7 761 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 PRG3Q9Y2Y8 225 aaPredicted RBP19.85■□□□□ 0.77
PNKP-225ENST00000636214 NR2E1Q9Y466 385 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 IRAK3Q9Y616 596 aa19.85■□□□□ 0.77
PNKP-225ENST00000636214 TDRD15B5MCY1 1934 aaKnown RBP19.84■□□□□ 0.77
PNKP-225ENST00000636214 ARL5CA6NH57 179 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 NPTXRO95502 500 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 SSBP05455 408 aaKnown RBP eCLIP19.84■□□□□ 0.77
PNKP-225ENST00000636214 URODP06132 367 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 PPP2R5AQ15172 486 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 PADI6Q6TGC4 694 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 ZBTB33Q86T24 672 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 DEPTORQ8TB45 409 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 IFT74Q96LB3 600 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 RIPOR3Q96MK2 946 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 RPS6KC1Q96S38 1066 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 GAD1Q99259 594 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 KIF2CQ99661 725 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 GPRC5CQ9NQ84 441 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 MRPL17Q9NRX2 175 aaKnown RBP19.84■□□□□ 0.77
PNKP-225ENST00000636214 LRWD1Q9UFC0 647 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 PARP2Q9UGN5 583 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 SSX2IPQ9Y2D8 614 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 HES2Q9Y543 173 aa19.84■□□□□ 0.77
PNKP-225ENST00000636214 DDHD2O94830 711 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 FXR2P51116 673 aaKnown RBP eCLIP19.83■□□□□ 0.77
PNKP-225ENST00000636214 SCNN1GP51170 649 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 AMHR2Q16671 573 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 MCTP1Q6DN14 999 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 CABP7Q86V35 215 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 BCL7CQ8WUZ0 217 aaPredicted RBP19.83■□□□□ 0.77
PNKP-225ENST00000636214 ADPGKQ9BRR6 497 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 S1PR5Q9H228 398 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 ADAM7Q9H2U9 754 aa19.83■□□□□ 0.77
PNKP-225ENST00000636214 NXF3Q9H4D5 531 aaKnown RBP19.83■□□□□ 0.77
PNKP-225ENST00000636214 ARIH1Q9Y4X5 557 aaPredicted RBP19.83■□□□□ 0.77
PNKP-225ENST00000636214 NRP1O14786 923 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 N4BP3O15049 544 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 B4GALT5O43286 388 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 LIG1P18858 919 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 CYP11B2P19099 503 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 KLRC2P26717 231 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 PLA2G5P39877 138 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 MTHFRP42898 656 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 PTPN14Q15678 1187 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 MAPK6Q16659 721 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 RARS2Q5T160 578 aaKnown RBP19.82■□□□□ 0.76
PNKP-225ENST00000636214 ELMSAN1Q6PJG2 1045 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 SNX29Q8TEQ0 813 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 MUC6Q6W4X9 2439 aa19.82■□□□□ 0.76
PNKP-225ENST00000636214 A0A1B0GUA9 196 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 LAD1O00515 517 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 INPPL1O15357 1258 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 B4GALT3O60512 393 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 SOD2P04179 222 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 PRKCBP05771 671 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 SP100P23497 879 aaPredicted RBP19.81■□□□□ 0.76
PNKP-225ENST00000636214 U2AF2P26368 475 aaKnown RBP eCLIP19.81■□□□□ 0.76
PNKP-225ENST00000636214 NAMPTP43490 491 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 AFF1P51825 1210 aaKnown RBP19.81■□□□□ 0.76
PNKP-225ENST00000636214 PTGDRQ13258 359 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 PRPF4BQ13523 1007 aaKnown RBP19.81■□□□□ 0.76
PNKP-225ENST00000636214 NBR1Q14596 966 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 KRT79Q5XKE5 535 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 CDCA2Q69YH5 1023 aaPredicted RBP19.81■□□□□ 0.76
PNKP-225ENST00000636214 KIAA1841Q6NSI8 718 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 CDR2LQ86X02 465 aaPredicted RBP19.81■□□□□ 0.76
PNKP-225ENST00000636214 COLGALT2Q8IYK4 626 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 EDAQ92838 391 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 MFSD14AQ96MC6 490 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 COLEC11Q9BWP8 271 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms