RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 GJB2P29033 226 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 SLC11A1P49279 550 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 TPRNQ4KMQ1 711 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 KRT79Q5XKE5 535 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 ANKRD54Q6NXT1 300 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 DTHD1Q6ZMT9 781 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 ZNF280BQ86YH2 543 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 C4orf32Q8N8J7 132 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 DEPTORQ8TB45 409 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 APOL6Q9BWW8 343 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 ZBP1Q9H171 429 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 SMC3Q9UQE7 1217 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 GIT1Q9Y2X7 761 aa20.98■□□□□ 0.95
CLN6-213ENST00000636212 DCXO43602 365 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 GPR37L1O60883 481 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 MLH1P40692 756 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 PRPHP41219 470 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 NAMPTP43490 491 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 AMHR2Q16671 573 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 PPP4R3CPQ6ZMV5 832 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 VN1R2Q8NFZ6 395 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 KHSRPQ92945 711 aaKnown RBP eCLIP20.97■□□□□ 0.958e-8■□□□□ 8.3
CLN6-213ENST00000636212 BHMT2Q9H2M3 363 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 DDX19AQ9NUU7 478 aaKnown RBP20.97■□□□□ 0.95
CLN6-213ENST00000636212 KIAA1024Q9UPX6 916 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 NCOR1O75376 2440 aa20.97■□□□□ 0.95
CLN6-213ENST00000636212 A0A1B0GUA9 196 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 ARL5CA6NH57 179 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 N4BP3O15049 544 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 DDHD2O94830 711 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 NPTXRO95502 500 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 CTSAP10619 480 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 OR1G1P47890 313 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 TOB1P50616 345 aaPredicted RBP20.96■□□□□ 0.95
CLN6-213ENST00000636212 RBM10P98175 930 aaKnown RBP20.96■□□□□ 0.95
CLN6-213ENST00000636212 MAPK6Q16659 721 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 CDCA2Q69YH5 1023 aaPredicted RBP20.96■□□□□ 0.95
CLN6-213ENST00000636212 CES5AQ6NT32 575 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 TMEM173Q86WV6 379 aaPredicted RBP20.96■□□□□ 0.95
CLN6-213ENST00000636212 IGSF22Q8N9C0 903 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 KIFAP3Q92845 792 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 TBC1D32Q96NH3 1257 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 GAD1Q99259 594 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 ADPGKQ9BRR6 497 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 LRFN3Q9BTN0 628 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 PHF7Q9BWX1 381 aaPredicted RBP20.96■□□□□ 0.95
CLN6-213ENST00000636212 EMILIN2Q9BXX0 1053 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
CLN6-213ENST00000636212 PARP2Q9UGN5 583 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 DNM3Q9UQ16 869 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 SSX2IPQ9Y2D8 614 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 HES2Q9Y543 173 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 IRAK3Q9Y616 596 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 BDP1A6H8Y1 2624 aa20.96■□□□□ 0.95
CLN6-213ENST00000636212 NRP1O14786 923 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 B4GALT5O43286 388 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 CLASP2O75122 1294 aaKnown RBP20.95■□□□□ 0.94
CLN6-213ENST00000636212 PRPF4BQ13523 1007 aaKnown RBP20.95■□□□□ 0.94
CLN6-213ENST00000636212 KCNC3Q14003 757 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 FAM187BQ17R55 369 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 PPFIBP1Q86W92 1011 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 RPS6KC1Q96S38 1066 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 NXF3Q9H4D5 531 aaKnown RBP20.95■□□□□ 0.94
CLN6-213ENST00000636212 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.95■□□□□ 0.94
CLN6-213ENST00000636212 DZANK1Q9NVP4 752 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 HCFC2Q9Y5Z7 792 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 MUC3AQ02505 3323 aa20.95■□□□□ 0.94
CLN6-213ENST00000636212 SPDYE4A6NLX3 237 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 INPPL1O15357 1258 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 PRKCBP05771 671 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 LIG1P18858 919 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 SCNN1GP51170 649 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 EFNA5P52803 228 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 CBX2Q14781 532 aaPredicted RBP20.94■□□□□ 0.94
CLN6-213ENST00000636212 APBB1IPQ7Z5R6 666 aaPredicted RBP20.94■□□□□ 0.94
CLN6-213ENST00000636212 APOL5Q9BWW9 433 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 RNF39Q9H2S5 420 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 FZD8Q9H461 694 aa20.94■□□□□ 0.94
CLN6-213ENST00000636212 URODP06132 367 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 AFF1P51825 1210 aaKnown RBP20.93■□□□□ 0.94
CLN6-213ENST00000636212 ITIH3Q06033 890 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 LARP1BQ659C4 914 aaKnown RBP20.93■□□□□ 0.94
CLN6-213ENST00000636212 CDR2LQ86X02 465 aaPredicted RBP20.93■□□□□ 0.94
CLN6-213ENST00000636212 RNF135Q8IUD6 432 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 COLGALT2Q8IYK4 626 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 BCL7CQ8WUZ0 217 aaPredicted RBP20.93■□□□□ 0.94
CLN6-213ENST00000636212 AUTS2Q8WXX7 1259 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 COLEC11Q9BWP8 271 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 MRPL17Q9NRX2 175 aaKnown RBP20.93■□□□□ 0.94
CLN6-213ENST00000636212 PRG3Q9Y2Y8 225 aaPredicted RBP20.93■□□□□ 0.94
CLN6-213ENST00000636212 HCN4Q9Y3Q4 1203 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 ZMYM2Q9UBW7 1377 aa20.93■□□□□ 0.94
CLN6-213ENST00000636212 FAM86C2PA6NEL3 165 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 PRR33A8MZF0 331 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 ACKR2O00590 384 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 CD2BP2O95400 341 aaKnown RBP20.92■□□□□ 0.94
CLN6-213ENST00000636212 SSBP05455 408 aaKnown RBP eCLIP20.92■□□□□ 0.94
CLN6-213ENST00000636212 AKAP5P24588 427 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 GRIK3Q13003 919 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 ECM1Q16610 540 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms