RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KCTD1Q719H9 257 aa15.9■□□□□ 0.14
CACNA1A-220ENST00000635988 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
CACNA1A-220ENST00000635988 CEP120Q8N960 986 aa15.9■□□□□ 0.14
CACNA1A-220ENST00000635988 LRRC19Q9H756 370 aa15.9■□□□□ 0.14
CACNA1A-220ENST00000635988 KCNK9Q9NPC2 374 aa15.9■□□□□ 0.14
CACNA1A-220ENST00000635988 GGT7Q9UJ14 662 aa15.9■□□□□ 0.14
CACNA1A-220ENST00000635988 SMNDC1O75940 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 ICA1Q05084 483 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CBWD6Q4V339 395 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CBWD3Q5JTY5 395 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CBWD5Q5RIA9 395 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 UBAP2Q5T6F2 1119 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 RINT1Q6NUQ1 792 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 SYDE1Q6ZW31 735 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 PALB2Q86YC2 1186 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 ZDHHC14Q8IZN3 488 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 MYCT1Q8N699 235 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 FITM2Q8N6M3 262 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 MAGEB18Q96M61 343 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 SLC24A3Q9HC58 644 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 TXLNGQ9NUQ3 528 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 DMAC2Q9NW81 257 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 STK38LQ9Y2H1 464 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 FOXN3O00409 490 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 STX2P32856 288 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CAV1Q03135 178 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CETN1Q12798 172 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 ANKRD20A2Q5SQ80 823 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 MFSD14BQ5SR56 506 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 ANKRD20A1Q5TYW2 823 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 ANKRD20A3Q5VUR7 823 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 PPP1R21Q6ZMI0 780 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 TEX9Q8N6V9 391 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 CD101Q93033 1021 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 PARVGQ9HBI0 331 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 ADAM22Q9P0K1 906 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
CACNA1A-220ENST00000635988 TMEM110-MUSTN1A8MSY1 372 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 MEIS2O14770 477 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 UNC5CO95185 931 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 PYGMP11217 842 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 MAN1A1P33908 653 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 MARCKSL1P49006 195 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 STRN3Q13033 797 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 BLMHQ13867 455 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 MESDQ14696 234 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 NFIXQ14938 502 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 ERICH1Q86X53 443 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 CLEC10AQ8IUN9 316 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 KIF2BQ8N4N8 673 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 ANKRD42Q8N9B4 389 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 PRCCQ92733 491 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 SAAL1Q96ER3 474 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 TGS1Q96RS0 853 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 NKIRAS1Q9NYS0 192 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 E7ENQ6 273 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 HIP1RO75146 1068 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 TTC4O95801 387 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 GZMAP12544 262 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 BRAFP15056 766 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 MYBPC2Q14324 1141 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 PARP6Q2NL67 630 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 PHLDB3Q6NSJ2 640 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 MICAL1Q8TDZ2 1067 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 LENG9Q96B70 501 aa15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 EIF2AK1Q9BQI3 630 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-220ENST00000635988 ANKRD63C9JTQ0 380 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 SPOPO43791 374 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 ACSL3O95573 720 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 ATP2B4P23634 1241 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 NMT1P30419 496 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 CIITAP33076 1130 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 SREBF1P36956 1147 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 RWDD2BP57060 319 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 CYP4A11Q02928 519 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 BFSP1Q12934 665 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 MTFR1Q15390 333 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 SIX1Q15475 284 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 RC3H1Q5TC82 1133 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 CDCA2Q69YH5 1023 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 NAIF1Q69YI7 327 aaPredicted RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 MIS18BP1Q6P0N0 1132 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 RNF207Q6ZRF8 634 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 SLC9A9Q8IVB4 645 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 TUFT1Q9NNX1 390 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 AGPAT3Q9NRZ7 376 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 VAV3Q9UKW4 847 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 ACTL7BQ9Y614 415 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 LRRN2O75325 713 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 PICALMQ13492 652 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 SPICE1Q8N0Z3 855 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 MAIP1Q8WWC4 291 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 DDX23Q9BUQ8 820 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms