RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DCUN1D2Q6PH85 259 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 PPP1R21Q6ZMI0 780 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 AGBL1Q96MI9 1066 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 MSTO1Q9BUK6 570 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 FAM204AQ9H8W3 233 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ANKZF1Q9H8Y5 726 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 TNRC6CQ9HCJ0 1690 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CLDN3O15551 220 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ICAM3P32942 547 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 PIK3CAP42336 1068 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 TPCN2Q8NHX9 752 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NTPCRQ9BSD7 190 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NCANO14594 1321 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SLC16A4O15374 487 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SUPT20HL2P0C7V6 817 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CDR2Q01850 454 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 C2orf54Q08AI8 447 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NCAPG2Q86XI2 1143 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 UBLCP1Q8WVY7 318 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 TAAR1Q96RJ0 339 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 DDX56Q9NY93 547 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 AGO2Q9UKV8 859 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ASTN1O14525 1302 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 A0A087X0T9 212 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 IQCA1LA6NCM1 817 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SEC31AO94979 1220 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 OATP04181 439 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 RPLP2P05387 115 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 FAM228BP0C875 321 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 STAT5BP51692 787 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 PPATQ06203 517 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 KCNMA1Q12791 1236 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 GRM1Q13255 1194 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 TCEAL1Q15170 157 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ASTE1Q2TB18 679 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 GLYCTKQ8IVS8 523 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CENPCQ03188 943 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ARSHQ5FYA8 562 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SWSAP1Q6NVH7 229 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC50Q8IVM0 306 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 HAUS1Q96CS2 278 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ATG4CQ96DT6 458 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 FMO2Q99518 471 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CYP26B1Q9NR63 512 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ADARB2Q9NS39 739 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ZBTB12Q9Y330 459 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 DCAF8L1A6NGE4 600 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NDUFAB1O14561 156 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ZEB2O60315 1214 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 IL18RAPO95256 599 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 LSM8O95777 96 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 PHKA2P46019 1235 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 GCLMP48507 274 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SNAP25P60880 206 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 EMC2Q15006 297 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 C6orf118Q5T5N4 469 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NFRKBQ6P4R8 1299 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 MAEAQ7L5Y9 396 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ERO1BQ86YB8 467 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SHCBP1Q8NEM2 672 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SMARCAD1Q9H4L7 1026 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 REXO2Q9Y3B8 237 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 BTAF1O14981 1849 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 HMGCS2P54868 508 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 TBC1D10BQ4KMP7 808 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 MAGOHBQ96A72 148 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 POLR3FQ9H1D9 316 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CNOT8Q9UFF9 292 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CAPN6Q9Y6Q1 641 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 ERICH4A6NGS2 130 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 SFI1A8K8P3 1242 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 FGGP02679 453 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 DRG2P55039 364 aaKnown RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NAA30Q147X3 362 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 MTERF2Q49AM1 385 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 AGBL2Q5U5Z8 902 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 HGSNATQ68CP4 663 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NT5DC4Q86YG4 428 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CREG2Q8IUH2 290 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 PRMT7Q9NVM4 692 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-210ENST00000635776 IP6K2Q9UHH9 426 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 NPHP3-ACAD11A0A0J9YXS1 232 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 HBP1O60381 514 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 INPP5BP32019 993 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 GPC3P51654 580 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PSMC6P62333 389 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 MCL1Q07820 350 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 CATSPERGQ6ZRH7 1159 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TRMT10CQ7L0Y3 403 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PCGF5Q86SE9 256 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF564Q8TBZ8 553 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TTC25Q96NG3 672 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PCIF1Q9H4Z3 704 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 SAMD15Q9P1V8 674 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ASIC3Q9UHC3 531 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF112Q9UJU3 913 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 KIAA1257Q9ULG3 409 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ARHGEF37A1IGU5 675 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms