RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF276Q8N554 614 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 MPHOSPH9Q99550 1183 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 INCENPQ9NQS7 918 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 GALNT8Q9NY28 637 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 ASXL1Q8IXJ9 1541 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 PTPRUQ92729 1446 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 ANKRD50Q9ULJ7 1429 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 PIK3R4Q99570 1358 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 ANKRD30AQ9BXX3 1397 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 A0A1W2PQU0 124 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 TRAF5O00463 557 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 RAB11FIP3O75154 756 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 PTGS1P23219 599 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 PTGS2P35354 604 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 MAN2A2P49641 1150 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 PPP2R2AP63151 447 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 ST5P78524 1137 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 ATP2C1P98194 919 aaPredicted RBP3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 AMPD3Q01432 767 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 SPIRE1Q08AE8 756 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 MAP4K2Q12851 820 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 HSP90AA2PQ14568 343 aaPredicted RBP3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 SEC23AQ15436 765 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 RABL3Q5HYI8 236 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 HECTD2Q5U5R9 776 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 OTOP2Q7RTS6 562 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 PROKR1Q8TCW9 393 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 NINJ1Q92982 152 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 MIEF2Q96C03 454 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 PGBD4Q96DM1 585 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 GPHA2Q96T91 129 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 IER2Q9BTL4 223 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 DHRS4Q9BTZ2 278 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 GPR87Q9BY21 358 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 IPPKQ9H8X2 491 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 ARHGAP28Q9P2N2 729 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 FAM184BQ9ULE4 1060 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 CD2APQ9Y5K6 639 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 COX11Q9Y6N1 276 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 MST1RQ04912 1400 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 RIMS2Q9UQ26 1411 aa3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 COL3A1P02461 1466 aaPredicted RBP3.41□□□□□ -1.86
SMARCB1-208ENST00000634926 PPLO60437 1756 aa3.4□□□□□ -1.86
SMARCB1-208ENST00000634926 GOLGB1Q14789 3259 aaKnown RBP3.4□□□□□ -1.86
SMARCB1-208ENST00000634926 POLR2AP24928 1970 aaKnown RBP3.4□□□□□ -1.86
SMARCB1-208ENST00000634926 TRAV20A0A0B4J274 112 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 A0A0G2JNJ9 132 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 A0A1W2PRX2 142 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 BLACEA4D250 179 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 AMY2AP04746 511 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 TSPY4P0CV99 314 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 TSPY10P0CW01 314 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 FGFR1P11362 822 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 KCNA6P17658 529 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 AMY2BP19961 511 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 AOAHP28039 575 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 CD38P28907 300 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 ADAM15Q13444 863 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 PTCH1Q13635 1447 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 MOGSQ13724 837 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 IDI1Q13907 227 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 FNDC3BQ53EP0 1204 aaKnown RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 TM4SF20Q53R12 229 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 CDC42BPGQ6DT37 1551 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 KNDC1Q76NI1 1749 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 CXXC5Q7LFL8 322 aaKnown RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 KRT26Q7Z3Y9 468 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 RD3Q7Z3Z2 195 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 CXorf67Q86X51 503 aaPredicted RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 NIM1KQ8IY84 436 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 RTKN2Q8IZC4 609 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 ANKRD35Q8N283 1001 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 MFSD3Q96ES6 412 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 EXOC2Q96KP1 924 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 CDC6Q99741 560 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 ABCA3Q99758 1704 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 AARSD1Q9BTE6 412 aaKnown RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 SETD5Q9C0A6 1442 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 NCOA5Q9HCD5 579 aaKnown RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 METTL14Q9HCE5 456 aaKnown RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 ARHGEF4Q9NR80 690 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 RIC8BQ9NVN3 520 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 Q9UFV3 132 aa3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 MARF1Q9Y4F3 1742 aaKnown RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 CTDP1Q9Y5B0 961 aaPredicted RBP3.4□□□□□ -1.87
SMARCB1-208ENST00000634926 JCADQ9P266 1359 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 ADGRL3Q9HAR2 1447 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 TRBV23-1A0A0A0MS06 115 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 MAN2B1O00754 1011 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 PLD2O14939 933 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 C4BPAP04003 597 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 SOD2P04179 222 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 MEOX1P50221 254 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 ADCY7P51828 1080 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 PABPC4Q13310 644 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 FOXB2Q5VYV0 432 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 FAM98AQ8NCA5 519 aaKnown RBP3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 KCTD13Q8WZ19 329 aa3.39□□□□□ -1.87
SMARCB1-208ENST00000634926 RABGGTAQ92696 567 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms