RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FAN1Q9Y2M0 1017 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 COL4A3BPQ9Y5P4 624 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 C2CD2LO14523 706 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 B4GALT3O60512 393 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 POMCP01189 267 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 MYBP10242 640 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 MCM7P33993 719 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 NUBP1P53384 320 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 PTPN14Q15678 1187 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 CALCRLQ16602 461 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 ASTLQ6HA08 431 aaPredicted RBP17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 FLCNQ8NFG4 579 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 VN1R3Q9BXE9 311 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 AGPAT5Q9NUQ2 364 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 USTQ9Y2C2 406 aa17.31■□□□□ 0.36
SNRNP48-203ENST00000634363 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 DKC1O60832 514 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 CNPP09543 421 aaKnown RBP17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 ORC2Q13416 577 aaPredicted RBP17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 GPR149Q86SP6 731 aa17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 MINDY3Q9H8M7 445 aa17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 SFXN1Q9H9B4 322 aa17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 MRPL17Q9NRX2 175 aaKnown RBP17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 KANSL3Q9P2N6 904 aa17.3■□□□□ 0.36
SNRNP48-203ENST00000634363 PLXNA3P51805 1871 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 WNT7AO00755 349 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 NRP1O14786 923 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 P4HBP07237 508 aaKnown RBP17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 CLCN4P51793 760 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 LAMTOR4Q0VGL1 99 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 PPP2R5CQ13362 524 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 CCDC149Q6ZUS6 474 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 OTOP3Q7RTS5 596 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 MRPL10Q7Z7H8 261 aaKnown RBP17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 EXOC8Q8IYI6 725 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 HAS1Q92839 578 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 WRAP73Q9P2S5 460 aaPredicted RBP17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 C2orf16Q68DN1 1984 aa17.29■□□□□ 0.36
SNRNP48-203ENST00000634363 ITGA4P13612 1032 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 HOXA11P31270 313 aaPredicted RBP17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 OR1G1P47890 313 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 ZNF174Q15697 407 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 XKR9Q5GH70 373 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 OTUD6AQ7L8S5 288 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 ASCL5Q7RTU5 278 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 DHX33Q9H6R0 707 aaKnown RBP17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 FBXL21Q9UKT6 434 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 PRG3Q9Y2Y8 225 aaPredicted RBP17.28■□□□□ 0.36
SNRNP48-203ENST00000634363 STK25O00506 426 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 ZBTB39O15060 712 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 ERLIN2O94905 339 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 YWHABP31946 246 aaKnown RBP17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 RFC5P40937 340 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 CLCN5P51795 746 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 TDGQ13569 410 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 UBXN11Q5T124 520 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 NCAPH2Q6IBW4 605 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 TAS1R1Q7RTX1 841 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 TCP11Q8WWU5 503 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 DYDC2Q96IM9 177 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 SNX27Q96L92 541 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 TMEM175Q9BSA9 504 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 KCNK12Q9HB15 430 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 STK39Q9UEW8 545 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 PCDHA12Q9UN75 941 aa17.27■□□□□ 0.36
SNRNP48-203ENST00000634363 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.35
SNRNP48-203ENST00000634363 CNTNAP2Q9UHC6 1331 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 CCDC195A0A1B0GUA6 201 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 ASAP2O43150 1006 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 PI15O43692 258 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 LILRB3O75022 631 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 URODP06132 367 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 SYT1P21579 422 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 TXKP42681 527 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 CTTNQ14247 550 aaKnown RBP17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 EPHA7Q15375 998 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 BRAPQ7Z569 592 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 FERMT3Q86UX7 667 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 TPH2Q8IWU9 490 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 CPB2Q96IY4 423 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 GAD1Q99259 594 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 LXNQ9BS40 222 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 APOL6Q9BWW8 343 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 MAN1C1Q9NR34 630 aa17.26■□□□□ 0.35
SNRNP48-203ENST00000634363 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 PROB1E7EW31 1015 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms