RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 SUPT20HL2P0C7V6 817 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 STXBP2Q15833 593 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 XKR3Q5GH77 459 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 KRT39Q6A163 491 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 EMBQ6PCB8 327 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 PARD3BQ8TEW8 1205 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 IFT74Q96LB3 600 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 TAS2R14Q9NYV8 317 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 TMEM59LQ9UK28 342 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 AMFRQ9UKV5 643 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 IGSF9BQ9UPX0 1349 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 MYH9P35579 1960 aaKnown RBP13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 PGRMC1O00264 195 aaKnown RBP13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 USP8P40818 1118 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 SLC39A4Q6P5W5 647 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 USP37Q86T82 979 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 PALB2Q86YC2 1186 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 DNERQ8NFT8 737 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 EXOC4Q96A65 974 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 TMEM8AQ9HCN3 771 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 SNCAIPQ9Y6H5 919 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 ADGRA3Q8IWK6 1321 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 BUB1BO60566 1050 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 GLI1P08151 1106 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 ZBTB48P10074 688 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 VGLL4Q14135 290 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 ANKRD35Q8N283 1001 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 HES6Q96HZ4 224 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 FBXL18Q96ME1 805 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 THAP2Q9H0W7 228 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 GDF3Q9NR23 364 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 H0YCG3 227 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 MFAP3P55082 362 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 GUCY2DQ02846 1103 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 SKIDA1Q1XH10 827 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 PPM1KQ8N3J5 372 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 KAT5Q92993 513 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 ARHGEF26Q96DR7 871 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 BICD1Q96G01 975 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 MFSD14AQ96MC6 490 aa13.21□□□□□ -0.29
PHACTR4-206ENST00000632421 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.295e-6■□□□□ 11
PHACTR4-206ENST00000632421 PHACTR2O75167 634 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 ICAM3P32942 547 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 ABCD1P33897 745 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 LMAN1P49257 510 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 SP2Q02086 613 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 PPATQ06203 517 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 CYP24A1Q07973 514 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 MTERF2Q49AM1 385 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 FAM71AQ8IYT1 594 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 RPUSD2Q8IZ73 545 aaKnown RBP13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 SEMA4DQ92854 862 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 CALR3Q96L12 384 aaKnown RBP13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 EPB41L5Q9HCM4 733 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.31e-6■■■■■ 73.7
PHACTR4-206ENST00000632421 COQ4Q9Y3A0 265 aa13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 NOC2LQ9Y3T9 749 aaKnown RBP13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.3
PHACTR4-206ENST00000632421 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 GARTP22102 1010 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 GTF2H1P32780 548 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 PAK2Q13177 524 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 CYFIP1Q7L576 1253 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 KREMEN1Q96MU8 473 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 GOLGA6BA6NDN3 693 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 RNF40O75150 1001 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 GPC3P51654 580 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 NNTQ13423 1086 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 EMC2Q15006 297 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 LBX2Q6XYB7 198 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 RASGEF1CQ8N431 466 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 ZNF302Q9NR11 478 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 KCNG1Q9UIX4 513 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 PTPRFP10586 1907 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 RAD51CO43502 376 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 FTLP02792 175 aaPredicted RBP13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 GGCXP38435 758 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 ZSCAN26Q16670 478 aa13.2□□□□□ -0.3
PHACTR4-206ENST00000632421 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms