RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 SIT1Q9Y3P8 196 aa11.77□□□□□ -0.53
SPTAN1-220ENST00000630147 COL4A3BPQ9Y5P4 624 aa11.77□□□□□ -0.53
SPTAN1-220ENST00000630147 ACACBO00763 2458 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 EML1O00423 815 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 TGM5O43548 720 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 DTNBO60941 627 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 ZNF623O75123 536 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 ITGA4P13612 1032 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 NLRP5P59047 1200 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 AKAP17AQ02040 695 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 SNW1Q13573 536 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 DCLRE1AQ6PJP8 1040 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 CDR2LQ86X02 465 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 PRPF31Q8WWY3 499 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 RUBCNQ92622 972 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 TMEM175Q9BSA9 504 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 INO80BQ9C086 356 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 WRAP73Q9P2S5 460 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 IPPQ9Y573 584 aa11.76□□□□□ -0.53
SPTAN1-220ENST00000630147 ARL5CA6NH57 179 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 LAMP2P13473 410 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 CD72P21854 359 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 HOXA11P31270 313 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 GPC5P78333 572 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 HTR4Q13639 388 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 PUM1Q14671 1186 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 NONOQ15233 471 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 KIAA0319Q5VV43 1072 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 ZC3H14Q6PJT7 736 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 PRSS55Q6UWB4 352 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 PARM1Q6UWI2 310 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 MRPL10Q7Z7H8 261 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 MAML2Q8IZL2 1156 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 CCDC148Q8NFR7 591 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 CMASQ8NFW8 434 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 PJA1Q8NG27 643 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 HASPINQ8TF76 798 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 FGF14Q92915 247 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 SLKQ9H2G2 1235 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 SPATA6Q9NWH7 488 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 KLK14Q9P0G3 267 aa11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 MTF2Q9Y483 593 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 MAP1BP46821 2468 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-220ENST00000630147 SLC37A4O43826 429 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 GAS2O43903 313 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 AKAP5P24588 427 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 LAMTOR4Q0VGL1 99 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 UBXN2BQ14CS0 331 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 TSSK4Q6SA08 328 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 SUMF1Q8NBK3 374 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 KXD1Q9BQD3 176 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 NXF3Q9H4D5 531 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 NCDNQ9UBB6 729 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 POLIQ9UNA4 740 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 CNTNAP2Q9UHC6 1331 aa11.74□□□□□ -0.53
SPTAN1-220ENST00000630147 KMT2BQ9UMN6 2715 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 ZBTB39O15060 712 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 CCL16O15467 120 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 TSPAN1O60635 241 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 ERLIN2O94905 339 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 FSHRP23945 695 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 USP11P51784 963 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 PSMC5P62195 406 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 DSG1Q02413 1049 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 CSTF1Q05048 431 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 EMC2Q15006 297 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 NTRK3Q16288 839 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 INF2Q27J81 1249 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 Q4G0T1 1027 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 FUT10Q6P4F1 479 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 B3GNT9Q6UX72 402 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 RDM1Q8NG50 284 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 ETNPPLQ8TBG4 499 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 SLC7A3Q8WY07 619 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 PAAF1Q9BRP4 392 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 PRKD2Q9BZL6 878 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 SEMA4AQ9H3S1 761 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 RXFP1Q9HBX9 757 aa11.73□□□□□ -0.53
SPTAN1-220ENST00000630147 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms