RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 DHX33Q9H6R0 707 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 CHST12Q9NRB3 414 aa10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 PUF60Q9UHX1 559 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 INPP5FQ9Y2H2 1132 aa10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
SPTAN1-219ENST00000629378 PRR33A8MZF0 331 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 LOC730098B7Z3J9 87 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 TBX3O15119 743 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 OFD1O75665 1012 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 ZNF202O95125 648 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 CXCL14O95715 111 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 GCFC2P16383 781 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 SFPQP23246 707 aaKnown RBP eCLIP10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 YWHABP31946 246 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 CA8P35219 290 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 TXKP42681 527 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 POLGP54098 1239 aaPredicted RBP10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 CDC42EP1Q00587 391 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 KRT17Q04695 432 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 LAMTOR4Q0VGL1 99 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 SPECC1Q5M775 1068 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 UBXN11Q5T124 520 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 SYCE2Q6PIF2 218 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 ZNF410Q86VK4 478 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 ZNF280BQ86YH2 543 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 C4orf19Q8IY42 314 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 RPGRIP1Q96KN7 1286 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 EIF2AK1Q9BQI3 630 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 TSPY26PQ9H489 355 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 NRDE2Q9H7Z3 1164 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 FAM105AQ9NUU6 356 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 TBC1D13Q9NVG8 400 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 DNAJB4Q9UDY4 337 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 KCNH3Q9ULD8 1083 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 LZTS1Q9Y250 596 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 PCDHB2Q9Y5E7 798 aa10.05□□□□□ -0.8
SPTAN1-219ENST00000629378 VWA3AA6NCI4 1184 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 C2orf71A6NGG8 1288 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 ZC3H11AO75152 810 aaKnown RBP eCLIP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 DDHD2O94830 711 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 GALTP07902 379 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 WEE2P0C1S8 567 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 HOXA11P31270 313 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 ALDH7A1P49419 539 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 ORC2Q13416 577 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 EMC2Q15006 297 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 IL17AQ16552 155 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 L1TD1Q5T7N2 865 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 ARL6IP4Q66PJ3 421 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 TMEM184AQ6ZMB5 413 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 AGMOQ6ZNB7 445 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 HFE2Q6ZVN8 426 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 SLFN12Q8IYM2 578 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 C12orf76Q8N812 135 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 SLC7A3Q8WY07 619 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 VN1R3Q9BXE9 311 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 INO80BQ9C086 356 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 TMEM60Q9H2L4 133 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 XPNPEP1Q9NQW7 623 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 AGPAT5Q9NUQ2 364 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 PCDHA12Q9UN75 941 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 HCN4Q9Y3Q4 1203 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
SPTAN1-219ENST00000629378 MYO10Q9HD67 2058 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 LAD1O00515 517 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 NEMFO60524 1076 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 DKC1O60832 514 aaKnown RBP eCLIP10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 ZNF623O75123 536 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 POMCP01189 267 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 PPM1AP35813 382 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 RFC5P40937 340 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 SLC11A1P49279 550 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 SMC1AQ14683 1233 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 CALCRLQ16602 461 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 DTHD1Q6ZMT9 781 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 RBM43Q6ZSC3 357 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 OTUD6AQ7L8S5 288 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 SRGAP1Q7Z6B7 1085 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 VPS52Q8N1B4 723 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 RNF149Q8NC42 400 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 SMG8Q8ND04 991 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 ASAP3Q8TDY4 903 aa10.03□□□□□ -0.8
SPTAN1-219ENST00000629378 PIGOQ8TEQ8 1089 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms