RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TUBE1Q9UJT0 475 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 PCDHGC5Q9Y5F6 944 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 MEN1O00255 615 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 PER2O15055 1255 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 ZNF500O60304 480 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 TGFB3P10600 412 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 CD52P31358 61 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 MRPS9P82933 396 aaKnown RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 SLC35G1Q2M3R5 365 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 UVSSAQ2YD98 709 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 FOXD4L6Q3SYB3 417 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 FOXD4L3Q6VB84 417 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 CATIPQ7Z7H3 387 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 FAM184AQ8NB25 1140 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 TRAPPC12Q8WVT3 735 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 C11orf84Q9BUA3 381 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 FAM86C1Q9NVL1 165 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 DDX39AO00148 427 aaKnown RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 STXBP3O00186 592 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 CYTH3O43739 400 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 LETM1O95202 739 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 BMPR1AP36894 532 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 PLA2G4AP47712 749 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 NRIP1P48552 1158 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 GATMP50440 423 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 HTRA4P83105 476 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 RBM10P98175 930 aaKnown RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 KCNC4Q03721 635 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 ZP2Q05996 745 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 RAB33AQ14088 237 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 UBE2SQ16763 222 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 ZNF438Q7Z4V0 828 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 RSPH3Q86UC2 560 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 CTCFLQ8NI51 663 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 GTF3C6Q969F1 213 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 GPR20Q99678 358 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 LRRC2Q9BYS8 371 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 SNTG2Q9NY99 539 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 ZMYM6O95789 1325 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 FIBPO43427 364 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 CHRNA1P02708 482 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 CYP21A2P08686 494 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 PDCP20941 246 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 MCM5P33992 734 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 NHLH1Q02575 133 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 TYRO3Q06418 890 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 KANK3Q6NY19 840 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 RNF169Q8NCN4 708 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 NEK9Q8TD19 979 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 PPP2R3CQ969Q6 453 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 RRP36Q96EU6 259 aaKnown RBP5.43□□□□□ -1.54
LINC00550-201ENST00000629293 PGBD1Q96JS3 809 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 CNTNAP3BQ96NU0 1288 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 DSCC1Q9BVC3 393 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 CNTNAP3Q9BZ76 1288 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.43□□□□□ -1.54
LINC00550-201ENST00000629293 BARX2Q9UMQ3 279 aaPredicted RBP5.43□□□□□ -1.54
LINC00550-201ENST00000629293 ZKSCAN5Q9Y2L8 839 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 CDY2AQ9Y6F7 541 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 MYO10Q9HD67 2058 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 CHD8Q9HCK8 2581 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 M0QZ92 97 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 ATP9AO75110 1047 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 TBX10O75333 385 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 ZIC2O95409 532 aaPredicted RBP5.43□□□□□ -1.54
LINC00550-201ENST00000629293 THBS1P07996 1170 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 ARSDP51689 593 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 HYAL1Q12794 435 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 LPIN1Q14693 890 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 GRIK4Q16099 956 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 NLRX1Q86UT6 975 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 ADHFE1Q8IWW8 467 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 SHDQ96IW2 340 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 TCEANC2Q96MN5 208 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 TMEM74Q96NL1 305 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 INPP4AQ96PE3 977 aaPredicted RBP5.43□□□□□ -1.54
LINC00550-201ENST00000629293 NT5C1AQ9BXI3 368 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 AGXT2Q9BYV1 514 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 AZI2Q9H6S1 392 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 AGO3Q9H9G7 860 aaKnown RBP5.43□□□□□ -1.54
LINC00550-201ENST00000629293 ADGRA3Q8IWK6 1321 aa5.43□□□□□ -1.54
LINC00550-201ENST00000629293 SPDYE3A6NKU9 549 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 MARCH6O60337 910 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 OFD1O75665 1012 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 LTBRP36941 435 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 TRAF1Q13077 416 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 SEC23AQ15436 765 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 HEATR3Q7Z4Q2 680 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 SUGP1Q8IWZ8 645 aaKnown RBP5.42□□□□□ -1.54
LINC00550-201ENST00000629293 MEIOBQ8N635 442 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 KLHL23Q8NBE8 558 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 RNF214Q8ND24 703 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 ZNF668Q96K58 619 aaPredicted RBP5.42□□□□□ -1.54
LINC00550-201ENST00000629293 SAMD11Q96NU1 681 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 NEK1Q96PY6 1258 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 TCF12Q99081 682 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 CCDC39Q9UFE4 941 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 A0A1W2PP55 124 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 VPS37CA5D8V6 355 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms