RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	DPP7	Q9UHL4	492 aa		4.15	□□□□□ -1.75
CNOT1-223	ENST00000628857	COL4A3BP	Q9Y5P4	624 aa		4.15	□□□□□ -1.75
CNOT1-223	ENST00000628857	GOLGA6L6	A8MZA4	724 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	RBP3	P10745	1247 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	AGXT	P21549	392 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	GUCY2F	P51841	1108 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	MALL	Q13021	153 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	PTPRO	Q16827	1216 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	MST1L	Q2TV78	715 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	MBNL2	Q5VZF2	373 aa	Known RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	GPRIN1	Q7Z2K8	1008 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	FAM83A	Q86UY5	434 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	TMPRSS6	Q8IU80	811 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	CMIP	Q8IY22	773 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	CBARP	Q8N350	705 aa	Predicted RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	MSL3	Q8N5Y2	521 aa	Known RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	PRPF38A	Q8NAV1	312 aa	Known RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	OR5M3	Q8NGP4	307 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	ST8SIA2	Q92186	375 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	ARL8A	Q96BM9	186 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	CYFIP2	Q96F07	1278 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	IL17RA	Q96F46	866 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	KRTAP4-9	Q9BYQ8	210 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	SLC13A1	Q9BZW2	595 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	BCO1	Q9HAY6	547 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	TLR9	Q9NR96	1032 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	DNAJC28	Q9NX36	388 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	GPRC5D	Q9NZD1	345 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	FAM30A	Q9NZY2	134 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	NOP58	Q9Y2X3	529 aa	Known RBP	4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	GPR45	Q9Y5Y3	372 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	WASHC2C	Q9Y4E1	1318 aa		4.14	□□□□□ -1.75
CNOT1-223	ENST00000628857	PLSCR1	O15162	318 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	GNAT2	P19087	354 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	NCL	P19338	710 aa	Known RBP	4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	MCAM	P43121	646 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	ACAP1	Q15027	740 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	ELAVL1	Q15717	326 aa	Known RBP	4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	MIIP	Q5JXC2	388 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	LCE5A	Q5TCM9	118 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	ABHD15	Q6UXT9	468 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	AMOTL1	Q8IY63	956 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	ZNF480	Q8WV37	535 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	RIN2	Q8WYP3	895 aa	Predicted RBP	4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	ACE2	Q9BYF1	805 aa	Predicted RBP	4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	TRIM8	Q9BZR9	551 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	TYW1	Q9NV66	732 aa	Known RBP	4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	ZBTB21	Q9ULJ3	1066 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	EDAR	Q9UNE0	448 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	XDH	P47989	1333 aa		4.13	□□□□□ -1.75
CNOT1-223	ENST00000628857	SHTN1	A0MZ66	631 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	ANKRD62	A6NC57	917 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	FAM171A2	A8MVW0	826 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	CAPN14	A8MX76	684 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857		B5MCH6	92 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	PJA2	O43164	708 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	PRAMEF4	O60810	478 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	ENDOD1	O94919	500 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	INSRR	P14616	1297 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	TNFRSF1A	P19438	455 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	CASR	P41180	1078 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	MAN2A2	P49641	1150 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	FLT3LG	P49771	235 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	CDKN1C	P49918	316 aa	Predicted RBP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	RABGGTB	P53611	331 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	APBA1	Q02410	837 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	MGAT2	Q10469	447 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	FOXE3	Q13461	319 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	MTMR1	Q13613	665 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	FAM47A	Q5JRC9	791 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	TOR2A	Q5JU69	321 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	RNF207	Q6ZRF8	634 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	FAM177A1	Q8N128	213 aa	Predicted RBP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	OR7D4	Q8NG98	312 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	COG1	Q8WTW3	980 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	TGFBRAP1	Q8WUH2	860 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	ZNF503	Q96F45	646 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	TMEM176A	Q96HP8	235 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	FAXDC2	Q96IV6	333 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	CDC5L	Q99459	802 aa	Known RBP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	QRSL1	Q9H0R6	528 aa	Known RBP	4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	PARPBP	Q9NWS1	579 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	TRPS1	Q9UHF7	1281 aa		4.12	□□□□□ -1.75
CNOT1-223	ENST00000628857	KLHL33	A6NCF5	533 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	MATN3	O15232	486 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	PPFIA4	O75335	1185 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	ITGA10	O75578	1167 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	HSP90B1	P14625	803 aa	Known RBP	4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	MGAT1	P26572	445 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	ECHS1	P30084	290 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	CDK17	Q00537	523 aa		4.11	□□□□□ -1.75
CNOT1-223	ENST00000628857	SRSF2	Q01130	221 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms