RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 K7ENM7 598 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 PES1O00541 588 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 CLIC2O15247 247 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 SLC16A4O15374 487 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 CALUO43852 315 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 NR3C1P04150 777 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 KLK7P49862 253 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 UBXN1Q04323 297 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 ADAM9Q13443 819 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 DRP2Q13474 957 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 ADGRE1Q14246 886 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 EMC2Q15006 297 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 PLCB4Q15147 1175 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 PPP2R2DQ66LE6 453 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 TAS1R3Q7RTX0 852 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 PLPPR4Q7Z2D5 763 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 HAUS6Q7Z4H7 955 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 FAM167AQ96KS9 214 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 TTYH3Q9C0H2 523 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 ATP6V0A4Q9HBG4 840 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 AGPAT3Q9NRZ7 376 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 YBX2Q9Y2T7 364 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 KAT6AQ92794 2004 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 UMODL1Q5DID0 1318 aa10.4□□□□□ -0.74
PDLIM5-223ENST00000627587 A0A1W2PQC6 194 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 ZBBXA8MT70 800 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 CETN3O15182 167 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 ZNF500O60304 480 aaPredicted RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 GNA14O95837 355 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 HOXD8P13378 290 aaPredicted RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 ATP2A2P16615 1042 aaKnown RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 COL9A1P20849 921 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 SFPQP23246 707 aaKnown RBP eCLIP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 MARK3P27448 753 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 ARL2P36404 184 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 DNM2P50570 870 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 ADKP55263 362 aaKnown RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 RBL2Q08999 1139 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 DMP1Q13316 513 aaPredicted RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 LAMC2Q13753 1193 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 MAN2A1Q16706 1144 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 VWA3BQ502W6 1294 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 NFRKBQ6P4R8 1299 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 PPTC7Q8NI37 304 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 ADAMTS19Q8TE59 1207 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 TMEM174Q8WUU8 243 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 AFG1LQ8WV93 481 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 GLG1Q92896 1179 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC9A7Q96T83 725 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 UHRF1Q96T88 793 aaPredicted RBP10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 WNT8AQ9H1J5 351 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 NDST4Q9H3R1 872 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 RNPEPQ9H4A4 650 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 C17orf75Q9HAS0 396 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 SIK3Q9Y2K2 1263 aa10.4□□□□□ -0.75
PDLIM5-223ENST00000627587 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 NRDCO43847 1150 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 GH1P01241 217 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 MYL3P08590 195 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 GLRA2P23416 452 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 RPL13P26373 211 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 SMTNP53814 917 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 PURAQ00577 322 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 BFSP2Q13515 415 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 CCDC40Q4G0X9 1142 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC39A4Q6P5W5 647 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 HS2ST1Q7LGA3 356 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 ZSWIM2Q8NEG5 633 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 OR6J1Q8NGC5 347 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 ATP8B4Q8TF62 1192 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 KCNN1Q92952 543 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 ERGIC2Q96RQ1 377 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 C16orf70Q9BSU1 422 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 POLR3FQ9H1D9 316 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 ARHGAP28Q9P2N2 729 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 PPME1Q9Y570 386 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 MYO9BQ13459 2157 aa10.39□□□□□ -0.75
PDLIM5-223ENST00000627587 A6NJR5 290 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 EPHB6O15197 1021 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 MFAP3LO75121 409 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 MAFO75444 373 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 PARNO95453 639 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 LGALS2P05162 132 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SKILP12757 684 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 ADSSP30520 456 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 CASP14P31944 242 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 RFC5P40937 340 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC26A2P50443 739 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 KCNMA1Q12791 1236 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms