RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 DPP7Q9UHL4 492 aa18.4■□□□□ 0.54
TRIM29-221ENST00000627238 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
TRIM29-221ENST00000627238 CCNT1O60563 726 aaKnown RBP18.39■□□□□ 0.53
TRIM29-221ENST00000627238 SRGAP2CP0DJJ0 459 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 PTENP60484 403 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 FEZF2Q8TBJ5 459 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 HDAC7Q8WUI4 952 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 FAM193BQ96PV7 902 aaPredicted RBP18.39■□□□□ 0.53
TRIM29-221ENST00000627238 MTRQ99707 1265 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 SLKQ9H2G2 1235 aaPredicted RBP18.39■□□□□ 0.53
TRIM29-221ENST00000627238 RXFP1Q9HBX9 757 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 PDRG1Q9NUG6 133 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 DUSP12Q9UNI6 340 aa18.39■□□□□ 0.53
TRIM29-221ENST00000627238 RIF1Q5UIP0 2472 aaKnown RBP18.38■□□□□ 0.53
TRIM29-221ENST00000627238 TSPAN1O60635 241 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 URODP06132 367 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 ITGA4P13612 1032 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 STK3Q13188 491 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 TDGQ13569 410 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 AMHR2Q16671 573 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 KIAA0319Q5VV43 1072 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 CWF19L1Q69YN2 538 aaKnown RBP18.38■□□□□ 0.53
TRIM29-221ENST00000627238 NOTUMQ6P988 496 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 XPNPEP1Q9NQW7 623 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 RGL1Q9NZL6 768 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 IGSF9Q9P2J2 1179 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 IPPQ9Y573 584 aa18.38■□□□□ 0.53
TRIM29-221ENST00000627238 TDRD15B5MCY1 1934 aaKnown RBP18.38■□□□□ 0.53
TRIM29-221ENST00000627238 ARL5CA6NH57 179 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 PFKFB2O60825 505 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 ERLIN2O94905 339 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 SLITRK3O94933 977 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 POMCP01189 267 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 ADH1AP07327 375 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 AOC1P19801 751 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 XKR9Q5GH70 373 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 PIK3AP1Q6ZUJ8 805 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 TNFRSF25Q93038 417 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 DYDC2Q96IM9 177 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 HSD17B14Q9BPX1 270 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
TRIM29-221ENST00000627238 EIF2AQ9BY44 585 aaKnown RBP18.37■□□□□ 0.53
TRIM29-221ENST00000627238 CSRNP2Q9H175 543 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 KCNK12Q9HB15 430 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 WDR6Q9NNW5 1121 aaKnown RBP18.37■□□□□ 0.53
TRIM29-221ENST00000627238 MAN1C1Q9NR34 630 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 CHST7Q9NS84 486 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 GIT1Q9Y2X7 761 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 MTCL1Q9Y4B5 1905 aaKnown RBP18.37■□□□□ 0.53
TRIM29-221ENST00000627238 SPTBN4Q9H254 2564 aa18.37■□□□□ 0.53
TRIM29-221ENST00000627238 FAM186AA6NE01 2351 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 TEX28O15482 410 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
TRIM29-221ENST00000627238 NPR3P17342 541 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 GLUD2P49448 558 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 DSG1Q02413 1049 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 NCBP1Q09161 790 aaKnown RBP18.36■□□□□ 0.53
TRIM29-221ENST00000627238 EARS2Q5JPH6 523 aaKnown RBP18.36■□□□□ 0.53
TRIM29-221ENST00000627238 NCAPH2Q6IBW4 605 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 ELMSAN1Q6PJG2 1045 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 MFSD1Q9H3U5 465 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 ANKEF1Q9NU02 776 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 EPS15L1Q9UBC2 864 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 DCHS1Q96JQ0 3298 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 WDR87Q6ZQQ6 2873 aa18.36■□□□□ 0.53
TRIM29-221ENST00000627238 PRR23AA6NEV1 266 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 ZBTB39O15060 712 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 DGAT1O75907 488 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 GLUD1P00367 558 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 SSBP05455 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRIM29-221ENST00000627238 ARL2P36404 184 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 MLH1P40692 756 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 MBTD1Q05BQ5 628 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 TFDP1Q14186 410 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 CTTNQ14247 550 aaKnown RBP18.35■□□□□ 0.53
TRIM29-221ENST00000627238 TAS1R1Q7RTX1 841 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 GSTCDQ8NEC7 633 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 WASF1Q92558 559 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 NXPE3Q969Y0 559 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 GAD1Q99259 594 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 PLEKHA4Q9H4M7 779 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 GJB4Q9NTQ9 266 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
TRIM29-221ENST00000627238 PTPRZ1P23471 2315 aaPredicted RBP18.34■□□□□ 0.53
TRIM29-221ENST00000627238 MARCH6O60337 910 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 N4BP1O75113 896 aaKnown RBP18.34■□□□□ 0.53
TRIM29-221ENST00000627238 CTDNEP1O95476 244 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 ARF4P18085 180 aaPredicted RBP18.34■□□□□ 0.53
TRIM29-221ENST00000627238 OR1G1P47890 313 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 AK2P54819 239 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 CYP4A11Q02928 519 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 CAPSQ13938 189 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 ASCL5Q7RTU5 278 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 STAMQ92783 540 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 SNX27Q96L92 541 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms