RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 MRPL17Q9NRX2 175 aaKnown RBP28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 TSPAN1O60635 241 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 LYPLA2O95372 231 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 PDGFBP01127 241 aaPredicted RBP28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 CLCN4P51793 760 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 TFDP1Q14186 410 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 NOTUMQ6P988 496 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 GPR149Q86SP6 731 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 NECAB1Q8N987 351 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 CCDC51Q96ER9 411 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 SFXN1Q9H9B4 322 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 ANKEF1Q9NU02 776 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 IPPQ9Y573 584 aa28.11■■■□□ 2.09
R3HDM4-208ENST00000626716 SPDYE4A6NLX3 237 aa28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 ASGR2P07307 311 aa28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 CALCRLQ16602 461 aa28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 IFNLR1Q8IU57 520 aaPredicted RBP28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 EIF2AQ9BY44 585 aaKnown RBP28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 IRF2BPLQ9H1B7 796 aa28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 RNF39Q9H2S5 420 aa28.1■■■□□ 2.09
R3HDM4-208ENST00000626716 INO80B-WBP1J3KQ70 363 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 SOD2P04179 222 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 NUBP1P53384 320 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 COLGALT2Q8IYK4 626 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 CPB2Q96IY4 423 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 CSRNP2Q9H175 543 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 TTC12Q9H892 705 aaPredicted RBP28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 SSX2IPQ9Y2D8 614 aa28.09■■■□□ 2.09
R3HDM4-208ENST00000626716 ARL5CA6NH57 179 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 INPPL1O15357 1258 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 DGAT1O75907 488 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 ARL2P36404 184 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 OR1G1P47890 313 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 ME3Q16798 604 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 FEZF2Q8TBJ5 459 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 ACSF2Q96CM8 615 aaPredicted RBP28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 GAD1Q99259 594 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 SMOC2Q9H3U7 446 aa28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 PRG3Q9Y2Y8 225 aaPredicted RBP28.08■■■□□ 2.09
R3HDM4-208ENST00000626716 USP34Q70CQ2 3546 aa28.08■■■□□ 2.08
R3HDM4-208ENST00000626716 C2CD2LO14523 706 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 URODP06132 367 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 OTOP3Q7RTS5 596 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 TAS1R1Q7RTX1 841 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 ASAP3Q8TDY4 903 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 GTF3C6Q969F1 213 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 RPS6KC1Q96S38 1066 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 MARCH5Q9NX47 278 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 HES2Q9Y543 173 aa28.07■■■□□ 2.08
R3HDM4-208ENST00000626716 TDRD15B5MCY1 1934 aaKnown RBP28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 BTBD18B2RXH4 712 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 MLH1P40692 756 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 TXKP42681 527 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 MBTD1Q05BQ5 628 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 DSC1Q08554 894 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 CAPSQ13938 189 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 CCDC43Q96MW1 224 aaKnown RBP28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 HERC2P3Q9BVR0 1158 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 NFKBIZQ9BYH8 718 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 MIOSQ9NXC5 875 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 GIT1Q9Y2X7 761 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 DENND4AQ7Z401 1863 aa28.06■■■□□ 2.08
R3HDM4-208ENST00000626716 NEMFO60524 1076 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 NR1I2O75469 434 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 XRCC6P12956 609 aaKnown RBP eCLIP28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 ARF4P18085 180 aaPredicted RBP28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 RARRES1P49788 294 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 AMHR2Q16671 573 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 C2orf16Q68DN1 1984 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 C15orf39Q6ZRI6 1047 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 CCDC149Q6ZUS6 474 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 NSUN7Q8NE18 718 aaKnown RBP28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 ATOH1Q92858 354 aaPredicted RBP28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 ZFP42Q96MM3 310 aa28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 TRIM6Q9C030 488 aaPredicted RBP28.05■■■□□ 2.08
R3HDM4-208ENST00000626716 ZFHX2Q9C0A1 2572 aaPredicted RBP28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 LARGE1O95461 756 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 EFEMP2O95967 443 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 ADH1AP07327 375 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 GLRA2P23416 452 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 SCNN1GP51170 649 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 KIAA0319Q5VV43 1072 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 DIS3L2Q8IYB7 885 aaKnown RBP28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 HACE1Q8IYU2 909 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 RNF168Q8IYW5 571 aaPredicted RBP28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 PIGOQ8TEQ8 1089 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 MTMR9Q96QG7 549 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 APOL6Q9BWW8 343 aa28.04■■■□□ 2.08
R3HDM4-208ENST00000626716 TEX28O15482 410 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 GLUD2P49448 558 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 TRIM29Q14134 588 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 CMASQ8NFW8 434 aaPredicted RBP28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 COLEC11Q9BWP8 271 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 RXFP1Q9HBX9 757 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 MAN1C1Q9NR34 630 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 FAM86C1Q9NVL1 165 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 DPP7Q9UHL4 492 aa28.03■■■□□ 2.08
R3HDM4-208ENST00000626716 A0A087WWV3 80 aa28.02■■■□□ 2.08
R3HDM4-208ENST00000626716 H0Y858 1186 aa28.02■■■□□ 2.08
R3HDM4-208ENST00000626716 WNT7AO00755 349 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms