RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ZFP42Q96MM3 310 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 RPS6KC1Q96S38 1066 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 GAD1Q99259 594 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 C22orf23Q9BZE7 217 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 MRPL17Q9NRX2 175 aaKnown RBP12.35□□□□□ -0.43
DDX41-218ENST00000625286 DUSP12Q9UNI6 340 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
DDX41-218ENST00000625286 IPPQ9Y573 584 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 A0A087WWV3 80 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 SLITRK3O94933 977 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 PAPLNO95428 1278 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 YWHABP31946 246 aaKnown RBP12.34□□□□□ -0.43
DDX41-218ENST00000625286 SCRN1Q12765 414 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 EMC2Q15006 297 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 EPHA7Q15375 998 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 C15orf39Q6ZRI6 1047 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 OTOP3Q7RTS5 596 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 C4orf19Q8IY42 314 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 SIX5Q8N196 739 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CMASQ8NFW8 434 aaPredicted RBP12.34□□□□□ -0.43
DDX41-218ENST00000625286 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
DDX41-218ENST00000625286 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 MYADMQ96S97 322 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 JPH2Q9BR39 696 aaPredicted RBP12.34□□□□□ -0.43
DDX41-218ENST00000625286 LXNQ9BS40 222 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 EMILIN2Q9BXX0 1053 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 GPR62Q9BZJ7 368 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 MFSD1Q9H3U5 465 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CHST7Q9NS84 486 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 KANSL3Q9P2N6 904 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CACNG4Q9UBN1 327 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 TDRD15B5MCY1 1934 aaKnown RBP12.34□□□□□ -0.43
DDX41-218ENST00000625286 CNTNAP2Q9UHC6 1331 aa12.34□□□□□ -0.43
DDX41-218ENST00000625286 CACNA1AO00555 2505 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 WNT7AO00755 349 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 B4GALT5O43286 388 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 ITGA4P13612 1032 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 MLH1P40692 756 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 RFC5P40937 340 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 OR1G1P47890 313 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 SCNN1GP51170 649 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 AK2P54819 239 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 PTENP60484 403 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 GALNT17Q6IS24 598 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 LILRA6Q6PI73 481 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 CCDC105Q8IYK2 499 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 ASAP3Q8TDY4 903 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.44
DDX41-218ENST00000625286 CXCL16Q9H2A7 254 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
DDX41-218ENST00000625286 WDR6Q9NNW5 1121 aaKnown RBP12.33□□□□□ -0.44
DDX41-218ENST00000625286 CYP46A1Q9Y6A2 500 aa12.33□□□□□ -0.44
DDX41-218ENST00000625286 CARNS1A5YM72 827 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 CPLX1O14810 134 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 CCNT1O60563 726 aaKnown RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 CFHP08603 1231 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 FDPSP14324 419 aaKnown RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 RPL17P18621 184 aaKnown RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 AKAP5P24588 427 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 DSG1Q02413 1049 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 CAPSQ13938 189 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 XKR9Q5GH70 373 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 NCAPH2Q6IBW4 605 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 PIK3AP1Q6ZUJ8 805 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 CDR2LQ86X02 465 aaPredicted RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 PALB2Q86YC2 1186 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 ADSSL1Q8N142 457 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 DTWD2Q8NBA8 298 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 TNFRSF25Q93038 417 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 HSD17B14Q9BPX1 270 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 TM6SF1Q9BZW5 370 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 NXF3Q9H4D5 531 aaKnown RBP12.32□□□□□ -0.44
DDX41-218ENST00000625286 EPS15L1Q9UBC2 864 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
DDX41-218ENST00000625286 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
DDX41-218ENST00000625286 TTLL13PA6NNM8 815 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms