RNA–Protein interactions for RNA: ENST00000624815.3

RBM7-209, Transcript of RNA binding motif protein 7, human

TSL 3 BASIC

Gene RBM7, Length 3,587 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM7-209	ENST00000624815	CTNNAL1	Q9UBT7	734 aa		11.18	□□□□□ -0.62
RBM7-209	ENST00000624815	COL4A3BP	Q9Y5P4	624 aa		11.18	□□□□□ -0.62
RBM7-209	ENST00000624815	hCG_2014768	A0A024R1R8	64 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	CETN3	O15182	167 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	ZSCAN9	O15535	394 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	ACSL3	O95573	720 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	VIL1	P09327	827 aa	Known RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	SNHG28	P0DPA3	235 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	ZBTB48	P10074	688 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	DPEP1	P16444	411 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	CALML3	P27482	149 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	SMARCA1	P28370	1054 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	SETDB1	Q15047	1291 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	SV2B	Q7L1I2	683 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	NELFCD	Q8IXH7	590 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	RASGEF1C	Q8N431	466 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	LRRC8C	Q8TDW0	803 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	SYN2	Q92777	582 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	TEKT1	Q969V4	418 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	KIAA1683	Q9H0B3	1180 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	PREB	Q9HCU5	417 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	PRKAG3	Q9UGI9	489 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	NAGPA	Q9UK23	515 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815		E7ENQ6	273 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815		M0R2N6	131 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	CCNT1	O60563	726 aa	Known RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	UBTFL6	P0CB48	400 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	AADACL2	Q6P093	401 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	NT5DC3	Q86UY8	548 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	C18orf8	Q96DM3	657 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	OSGEP	Q9NPF4	335 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	FAM198A	Q9UFP1	575 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	TBK1	Q9UHD2	729 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	AMFR	Q9UKV5	643 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	PCDHA4	Q9UN74	947 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	KIAA0391	O15091	583 aa	Known RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	RIPK2	O43353	540 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	CBX6	O95503	412 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	ZCCHC18	P0CG32	403 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	IMPDH2	P12268	514 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	SHMT1	P34896	483 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	OPTN	Q96CV9	577 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	ZBED3	Q96IU2	234 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	ZNF333	Q96JL9	665 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	PLEKHG4B	Q96PX9	1271 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	NAP1L3	Q99457	506 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	PITPNM3	Q9BZ71	974 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	DNAJC18	Q9H819	358 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	CTTNBP2NL	Q9P2B4	639 aa		11.17	□□□□□ -0.62
RBM7-209	ENST00000624815	TSPY2	A6NKD2	308 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SETSIP	P0DME0	302 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	ETS2	P15036	469 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	RPL21	P46778	160 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	PTEN	P60484	403 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	MPP2	Q14168	576 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SLC4A8	Q2Y0W8	1093 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SPDYC	Q5MJ68	293 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	VSTM1	Q6UX27	236 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SH3BP5L	Q7L8J4	393 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	MYLK4	Q86YV6	388 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	KIAA0825	Q8IV33	1275 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	AGGF1	Q8N302	714 aa	eCLIP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	U2AF1L4	Q8WU68	220 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SCG3	Q8WXD2	468 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	FAM136A	Q96C01	138 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	CALML4	Q96GE6	196 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	TRAPPC9	Q96Q05	1148 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	ZNF287	Q9HBT7	754 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	GALNT8	Q9NY28	637 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	MTRF1L	Q9UGC7	380 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	LRRC63	Q05C16	580 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	MYBPC3	Q14896	1274 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	ILDR2	Q71H61	639 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	GUF1	Q8N442	669 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	MTMR14	Q8NCE2	650 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	DTX3L	Q8TDB6	740 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	CKAP2	Q8WWK9	683 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	IFT43	Q96FT9	208 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	TMEM47	Q9BQJ4	181 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	DNAJC17	Q9NVM6	304 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SAP30BP	Q9UHR5	308 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	PCDHA6	Q9UN73	950 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	PTPN22	Q9Y2R2	807 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	PCDHA8	Q9Y5H6	950 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	USH1C	Q9Y6N9	552 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	H2AFZ	P0C0S5	128 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SKI	P12755	728 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	BRAF	P15056	766 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	ABCB4	P21439	1286 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SKIV2L2	P42285	1042 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	MCL1	Q07820	350 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	PARP6	Q2NL67	630 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	KHDC1	Q4VXA5	237 aa	Known RBP	11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	SNX30	Q5VWJ9	437 aa		11.16	□□□□□ -0.62
RBM7-209	ENST00000624815	TATDN1	Q6P1N9	297 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms