RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 KIRREL3Q8IZU9 778 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 ATP11CQ8NB49 1132 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 ALKBH8Q96BT7 664 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 NPHP3-ACAD11A0A0J9YXS1 232 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 COMTP21964 271 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 KCNA3P22001 575 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 ABCD1P33897 745 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 SP4Q02446 784 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 DEUP1Q05D60 604 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 DCAF4Q8WV16 495 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 NLRP7Q8WX94 980 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 KAT2BQ92831 832 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 FAM96AQ9H5X1 160 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 PGM1P36871 562 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 STAT3P40763 770 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 BASP1P80723 227 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 TMPRSS15P98073 1019 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 KRT39Q6A163 491 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 APTXQ7Z2E3 356 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 MAP7D3Q8IWC1 876 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 ADGRF4Q8IZF3 695 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 DYDC2Q96IM9 177 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 DCLRE1BQ9H816 532 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 IFT122Q9HBG6 1241 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 GINM1Q9NU53 330 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 ADAM22Q9P0K1 906 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 C3P01024 1663 aa12.58□□□□□ -0.39
ATRX-214ENST00000624166 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 E7ENQ6 273 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 H7C0C1 242 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 BMP3P12645 472 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 ATP5OP48047 213 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 XRCC4Q13426 336 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 SYDE2Q5VT97 1194 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 GSDMBQ8TAX9 411 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 CELF1Q92879 486 aaKnown RBP12.58□□□□□ -0.4
ATRX-214ENST00000624166 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.43e-8■■■□□ 16.4
ATRX-214ENST00000624166 ZSWIM1Q9BR11 485 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 PAGR1Q9BTK6 254 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 PDP2Q9P2J9 529 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.58□□□□□ -0.4
ATRX-214ENST00000624166 EMSYQ7Z589 1322 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 SNUPNO95149 360 aaKnown RBP12.58□□□□□ -0.4
ATRX-214ENST00000624166 ITGA4P13612 1032 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 ABCB5Q2M3G0 1257 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 ENOSF1Q7L5Y1 443 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 TAB3Q8N5C8 712 aaPredicted RBP12.58□□□□□ -0.4
ATRX-214ENST00000624166 INPP4AQ96PE3 977 aaPredicted RBP12.58□□□□□ -0.4
ATRX-214ENST00000624166 L3MBTL1Q9Y468 752 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 BTNL10A8MVZ5 291 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 CLDN3O15551 220 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 DEPTORQ8TB45 409 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 SERPINI1Q99574 410 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 WHRNQ9P202 907 aa12.58□□□□□ -0.4
ATRX-214ENST00000624166 EIF3DO15371 548 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATRX-214ENST00000624166 DRD4P21917 467 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 KRT81Q14533 505 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 ANKRD20A4Q4UJ75 823 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 COBLL1Q53SF7 1204 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 ANKRD20A2Q5SQ80 823 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 ANKRD20A1Q5TYW2 823 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 RINT1Q6NUQ1 792 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 RFX6Q8HWS3 928 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 C9orf72Q96LT7 481 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 TTC1Q99614 292 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 UBN1Q9NPG3 1134 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATRX-214ENST00000624166 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 ATRNO75882 1429 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 GARSP41250 739 aaKnown RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 RANBP1P43487 201 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 KCNJ1P48048 391 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 PRELPP51888 382 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 LACTB2Q53H82 288 aaPredicted RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 DAB2IPQ5VWQ8 1189 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 IRAK4Q9NWZ3 460 aa12.57□□□□□ -0.4
ATRX-214ENST00000624166 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 PPP1R1BQ9UD71 204 aaPredicted RBP12.57□□□□□ -0.4
ATRX-214ENST00000624166 MAGEA13PA6NCF6 341 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms