RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
CBWD3-218ENST00000622755 TMEM175Q9BSA9 504 aa13.59□□□□□ -0.23
CBWD3-218ENST00000622755 RNF19AQ9NV58 838 aa13.59□□□□□ -0.23
CBWD3-218ENST00000622755 TBC1D13Q9NVG8 400 aa13.59□□□□□ -0.23
CBWD3-218ENST00000622755 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
CBWD3-218ENST00000622755 A0A1B0GUA9 196 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 HIP1RO75146 1068 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 PLA2G4BP0C869 781 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 SCP2P22307 547 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 GUCY2CP25092 1073 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 STK38Q15208 465 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 RINT1Q6NUQ1 792 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 AGMOQ6ZNB7 445 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 ADAMTS19Q8TE59 1207 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 UHRF1Q96T88 793 aaPredicted RBP13.58□□□□□ -0.24
CBWD3-218ENST00000622755 COL25A1Q9BXS0 654 aaPredicted RBP13.58□□□□□ -0.24
CBWD3-218ENST00000622755 EIF2AQ9BY44 585 aaKnown RBP13.58□□□□□ -0.24
CBWD3-218ENST00000622755 FZD8Q9H461 694 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 FAN1Q9Y2M0 1017 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 MYH11P35749 1972 aa13.58□□□□□ -0.24
CBWD3-218ENST00000622755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 TBCAO75347 108 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 POMCP01189 267 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 MLH1P40692 756 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 NRIP1P48552 1158 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 CEBPZQ03701 1054 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 RESTQ13127 1097 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 AMHR2Q16671 573 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 LEXMQ3ZCV2 418 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 RBM23Q86U06 439 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 MMTAG2Q9BU76 263 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 MRPL4Q9BYD3 311 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 SSX2IPQ9Y2D8 614 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 CHD7Q9P2D1 2997 aa13.57□□□□□ -0.24
CBWD3-218ENST00000622755 TDRD15B5MCY1 1934 aaKnown RBP13.57□□□□□ -0.24
CBWD3-218ENST00000622755 ARL5CA6NH57 179 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 B4GALT5O43286 388 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 FAM13AO94988 1023 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 PLS3P13797 630 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 OR1G1P47890 313 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 NPTX2P47972 431 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 KCNQ1P51787 676 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 HYAL1Q12794 435 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 GRIK3Q13003 919 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 TPRNQ4KMQ1 711 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 EFHBQ8N7U6 833 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 KRI1Q8N9T8 703 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 SMG8Q8ND04 991 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 BSNDQ8WZ55 320 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 PNMA5Q96PV4 448 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 GAD1Q99259 594 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 RUSC1Q9BVN2 902 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 HCSTQ9UBK5 93 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 STK17AQ9UEE5 414 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 SRPRBQ9Y5M8 271 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 CLIC4Q9Y696 253 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 NT5C1B-RDH14C9J2C7 533 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 GALTP07902 379 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 DNAJB1P25685 340 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 PBX3P40426 434 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 PTCRAQ6ISU1 281 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 ELMSAN1Q6PJG2 1045 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 CCDC73Q6ZRK6 1079 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 BICD1Q96G01 975 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 IGSF21Q96ID5 467 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 KIFC3Q9BVG8 833 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-218ENST00000622755 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 HES2Q9Y543 173 aa13.56□□□□□ -0.24
CBWD3-218ENST00000622755 MEIS3P2A8K0S8 358 aa13.55□□□□□ -0.24
CBWD3-218ENST00000622755 H3BQ06 376 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-218ENST00000622755 TNFRSF10AO00220 468 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms