RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SEPT8Q92599 483 aa21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 MRPL4Q9BYD3 311 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 AGO3Q9H9G7 860 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 DACH1Q9UI36 760 aa21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 CNTNAP2Q9UHC6 1331 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 PSMA7O14818 248 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 TSPAN1O60635 241 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 BAIAP3O94812 1187 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 ERLIN2O94905 339 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 EDN1P05305 212 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 PRPF4BQ13523 1007 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 IKBKEQ14164 716 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 CT47A1Q5JQC4 288 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 NELFCDQ8IXH7 590 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 DHTKD1Q96HY7 919 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 IFIH1Q9BYX4 1025 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 KCTD10Q9H3F6 313 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 SLC4A7Q9Y6M7 1214 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 ZMYM2Q9UBW7 1377 aa21.75■■□□□ 1.07
PDLIM2-221ENST00000622702 GPR182O15218 404 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 FGFR4P22455 802 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 CENPPQ6IPU0 288 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 FAM43BQ6ZT52 329 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 SYCP3Q8IZU3 236 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 GBP3Q9H0R5 595 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 ERVK-5Q9HDB9 667 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 AGPAT5Q9NUQ2 364 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 ST3GAL5Q9UNP4 418 aa21.74■■□□□ 1.07
PDLIM2-221ENST00000622702 ABHD14A-ACY1A0A1B0GW23 586 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 TTLL13PA6NNM8 815 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 SOX1O00570 391 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 B4GALT5O43286 388 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 AXLP30530 894 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 ZNF445P59923 1031 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 SNRPFP62306 86 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 NCBP1Q09161 790 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 PAK2Q13177 524 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 ACO2Q99798 780 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 ANP32EQ9BTT0 268 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 TARS2Q9BW92 718 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 PADI3Q9ULW8 664 aa21.73■■□□□ 1.07
PDLIM2-221ENST00000622702 PDXKO00764 312 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 HNRNPDLO14979 420 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 TGFB1I1O43294 461 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 ARF4P18085 180 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 HOXA11P31270 313 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 CD52P31358 61 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 ZCWPW2Q504Y3 356 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 FAM109BQ6ICB4 259 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 FOXR2Q6PJQ5 311 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 APBB2Q92870 758 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 BICD1Q96G01 975 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 SEMA6BQ9H3T3 888 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 TYW1Q9NV66 732 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 CGNQ9P2M7 1197 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 TRAF3IP3Q9Y228 551 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 TNFSF13BQ9Y275 285 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 USP20Q9Y2K6 914 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 SZT2Q5T011 3432 aa21.72■■□□□ 1.07
PDLIM2-221ENST00000622702 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 A0A1B0GUA9 196 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 GRXCR1A8MXD5 290 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 EFCAB14O75071 495 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 TOM1L1O75674 476 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 CCNE1P24864 410 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 ERCC5P28715 1186 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 KCNJ6P48051 423 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 LIG4P49917 911 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 WDR5P61964 334 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 NFX1Q12986 1120 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 PAK1Q13153 545 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 ATF7IP2Q5U623 682 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 KLHL10Q6JEL2 608 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 SLC39A4Q6P5W5 647 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 LRSAM1Q6UWE0 723 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 HS2ST1Q7LGA3 356 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 GOLGA5Q8TBA6 731 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 P2RX5Q93086 422 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 LRCH3Q96II8 777 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 IKZF4Q9H2S9 585 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 PTPRHQ9HD43 1115 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 CHST12Q9NRB3 414 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 STYXL1Q9Y6J8 313 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 PROZP22891 400 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 FXR1P51114 621 aaKnown RBP eCLIP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 C11orf57Q6ZUT1 292 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 TMEM174Q8WUU8 243 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 NELFBQ8WX92 580 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 CCDC51Q96ER9 411 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 DNAJC25Q9H1X3 360 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 AGPAT3Q9NRZ7 376 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 RWDD2AQ9UIY3 292 aa21.71■■□□□ 1.07
PDLIM2-221ENST00000622702 MICAL3Q7RTP6 2002 aa21.7■■□□□ 1.07
PDLIM2-221ENST00000622702 ANKRD63C9JTQ0 380 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 ABLIM1O14639 778 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 ATP2A2P16615 1042 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 SMAD3P84022 425 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 LRRC63Q05C16 580 aa21.7■■□□□ 1.06
PDLIM2-221ENST00000622702 ANO6Q4KMQ2 910 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms