RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ZNF213O14771 459 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 ADCY3O60266 1144 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 DCTN3O75935 186 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 MGAT5Q09328 741 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TBL3Q12788 808 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 ACVR2BQ13705 512 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PDCD4Q53EL6 469 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 FAM182BQ5T319 152 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 POTEEQ6S8J3 1075 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 NEK10Q6ZWH5 1172 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 GABPB2Q8TAK5 448 aaPredicted RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 SRPK1Q96SB4 655 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 OSBPL10Q9BXB5 764 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 SYNCQ9H7C4 482 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 CHST12Q9NRB3 414 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PAG1Q9NWQ8 432 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 SCHIP1Q9P0W5 487 aaPredicted RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 ANGPTL2Q9UKU9 493 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 SLIT3O75094 1523 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TBX10O75333 385 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PSMG1O95456 288 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 GSTT2P0CG29 244 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 GSTT2BP0CG30 244 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 ITGA6P23229 1130 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PTPN4P29074 926 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 HNRNPH3P31942 346 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 ANTXR2P58335 489 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TAGLNQ01995 201 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 DSG1Q02413 1049 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 NR5A1Q13285 461 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 KIF22Q14807 665 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 EAPPQ56P03 285 aaPredicted RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 IZUMO2Q6UXV1 221 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 OTUD6AQ7L8S5 288 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PHLDB2Q86SQ0 1253 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PLPP6Q8IY26 295 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 EPS8L3Q8TE67 593 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 NLRP7Q8WX94 980 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 DDX12PQ92771 950 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 KAZALD1Q96I82 304 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 FAIMQ9NVQ4 179 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 EURLQ9NYK6 297 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TMCC3Q9ULS5 477 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 LAMA4Q16363 1823 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 MAST3O60307 1309 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 XDHP47989 1333 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 BTBD19C9JJ37 291 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 NEK3P51956 506 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 ARFIP2P53365 341 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TFCP2Q12800 502 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 NAB2Q15742 525 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 CCDC153Q494R4 210 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 VWA3BQ502W6 1294 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 SATL1Q86VE3 508 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 TREML1Q86YW5 311 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 ADSSL1Q8N142 457 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 VPS52Q8N1B4 723 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 CKAP2Q8WWK9 683 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 PRPF31Q8WWY3 499 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 MCUR1Q96AQ8 359 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 HSPBAP1Q96EW2 488 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 CNOT6LQ96LI5 555 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 HNRNPABQ99729 332 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 CELF4Q9BZC1 486 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 NRDE2Q9H7Z3 1164 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 STX18Q9P2W9 335 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 SAP30BPQ9UHR5 308 aaKnown RBP8.45□□□□□ -1.06
VPS11-209ENST00000622309 SPO11Q9Y5K1 396 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 FADS3Q9Y5Q0 445 aa8.45□□□□□ -1.06
VPS11-209ENST00000622309 NUP188Q5SRE5 1749 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 LRRC53A6NM62 1247 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 CES2O00748 559 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 CBX6O95503 412 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 EYA4O95677 639 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 CDK4P11802 303 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 ZNF132P52740 706 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 PLTPP55058 493 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 MTFR1Q15390 333 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 SEPT7Q16181 437 aaKnown RBP8.44□□□□□ -1.06
VPS11-209ENST00000622309 PTPROQ16827 1216 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 HSP90AA5PQ58FG0 334 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 PATL1Q86TB9 770 aaKnown RBP8.44□□□□□ -1.06
VPS11-209ENST00000622309 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS11-209ENST00000622309 FNDC8Q8TC99 324 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 ACTRT1Q8TDG2 376 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 SLC7A6OSQ96CW6 309 aaPredicted RBP8.44□□□□□ -1.06
VPS11-209ENST00000622309 ERGIC2Q96RQ1 377 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS11-209ENST00000622309 ZBTB3Q9H5J0 574 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 DDX43Q9NXZ2 648 aaKnown RBP8.44□□□□□ -1.06
VPS11-209ENST00000622309 NKIRAS1Q9NYS0 192 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 NOC2LQ9Y3T9 749 aaKnown RBP8.44□□□□□ -1.06
VPS11-209ENST00000622309 UMODL1Q5DID0 1318 aa8.44□□□□□ -1.06
VPS11-209ENST00000622309 MYH1P12882 1939 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms