RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 SPAG7O75391 227 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 PAX7P23759 505 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 PLTPP55058 493 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 ITKQ08881 620 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 GNASQ5JWF2 1037 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.63
COL25A1-209ENST00000622134 TMEM154Q6P9G4 183 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 PDS5AQ29RF7 1337 aaKnown RBP11.15□□□□□ -0.63
COL25A1-209ENST00000622134 MSCO60682 206 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ZRANB2O95218 330 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 KRT17Q04695 432 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 MAN2A1Q16706 1144 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 GEN1Q17RS7 908 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 GLB1LQ6UWU2 654 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ATG9AQ7Z3C6 839 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 TAF1DQ9H5J8 278 aaPredicted RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 PDP2Q9P2J9 529 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ZNF711Q9Y462 761 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 BCL9O00512 1426 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 H3BQF6 201 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SNAP23O00161 211 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SRGAP2O75044 1071 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 HOXA10P31260 410 aaPredicted RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 PEX3P56589 373 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 BAATQ14032 418 aaPredicted RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SWSAP1Q6NVH7 229 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SGMS1Q86VZ5 419 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 CNOT6LQ96LI5 555 aaKnown RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 EHD4Q9H223 541 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 TUFT1Q9NNX1 390 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ZFATQ9P243 1243 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 INTUQ9ULD6 942 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 TMEM131LA2VDJ0 1609 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 HBP1O60381 514 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 NR3C2P08235 984 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 CAP2P40123 477 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ADCY8P40145 1251 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SNX1Q13596 522 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 KRT31Q15323 416 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 AGGF1Q8N302 714 aaeCLIP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 RYBPQ8N488 228 aaPredicted RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 OR6B3Q8NGW1 331 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 GANCQ8TET4 914 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 FUCA2Q9BTY2 467 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 CCT8L1PA6NM43 557 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 DGAT1O75907 488 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 SLC44A4Q53GD3 710 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 KDM7AQ6ZMT4 941 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 THNSL1Q8IYQ7 743 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 PPP4R1Q8TF05 950 aa11.14□□□□□ -0.63
COL25A1-209ENST00000622134 XAB2Q9HCS7 855 aaKnown RBP11.14□□□□□ -0.63
COL25A1-209ENST00000622134 GYG2O15488 501 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
COL25A1-209ENST00000622134 DEFB115Q30KQ5 88 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 PREPLQ4J6C6 727 aaPredicted RBP11.13□□□□□ -0.63
COL25A1-209ENST00000622134 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 TRIML2Q8N7C3 387 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
COL25A1-209ENST00000622134 LRRC37BQ96QE4 947 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 ERAP1Q9NZ08 941 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 ATF2P15336 505 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 CCNE1P24864 410 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 CTTNQ14247 550 aaKnown RBP11.13□□□□□ -0.63
COL25A1-209ENST00000622134 PSMD6Q15008 389 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 AGBL2Q5U5Z8 902 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 RESP18Q5W5W9 173 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 CASC4Q6P4E1 433 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 DNAJC9Q8WXX5 260 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 HIC2Q96JB3 615 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 FSBPO95073 299 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 ZWINTO95229 277 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 ARHGAP22Q7Z5H3 698 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 XXYLT1Q8NBI6 393 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 SPATA4Q8NEY3 305 aa11.13□□□□□ -0.63
COL25A1-209ENST00000622134 DIS3Q9Y2L1 958 aaKnown RBP11.13□□□□□ -0.63
COL25A1-209ENST00000622134 PVALEFA0A1B0GWK0 134 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TBXAS1P24557 533 aaPredicted RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 EIF4A3P38919 411 aaKnown RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 RAD51Q06609 339 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 BYSLQ13895 437 aaKnown RBP11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 RHPN2Q8IUC4 686 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 DPF3Q92784 378 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 ZNF653Q96CK0 615 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 TMEM39BQ9GZU3 492 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 KCND1Q9NSA2 647 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 SYNGAP1Q96PV0 1343 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 GSTA1P08263 222 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 GPC3P51654 580 aa11.12□□□□□ -0.63
COL25A1-209ENST00000622134 BACE1P56817 501 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms