RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PLA2G4FQ68DD2 849 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 RPUSD2Q8IZ73 545 aaKnown RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 TMC2Q8TDI7 906 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 PARD3BQ8TEW8 1205 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ALG3Q92685 438 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 KIFAP3Q92845 792 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 KCNN1Q92952 543 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 MFSD14AQ96MC6 490 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 KREMEN1Q96MU8 473 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 RPS6KC1Q96S38 1066 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 MAF1Q9H063 256 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 PDLIM7Q9NR12 457 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.18□□□□□ -0.78
PDPN-212ENST00000621990 ZNF112Q9UJU3 913 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 PCDHA10Q9Y5I2 948 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ANKRD63C9JTQ0 380 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 TTI1O43156 1089 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ZEB2O60315 1214 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 CNGA1P29973 690 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 CCND2P30279 289 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SMTNP53814 917 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 TGFB2P61812 414 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 XKR9Q5GH70 373 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 FAM102BQ5T8I3 360 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 KRT39Q6A163 491 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 NOP9Q86U38 636 aaKnown RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 CBWD2Q8IUF1 395 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ATP8B4Q8TF62 1192 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SEMA4DQ92854 862 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ATP6V1G3Q96LB4 118 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 C12orf42Q96LP6 360 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 PCDHB18PQ96TA0 734 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SH2D3AQ9BRG2 576 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 TXLNGYQ9BZA5 131 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 TAOK3Q9H2K8 898 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 TMEM8AQ9HCN3 771 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 FAM114A2Q9NRY5 505 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 PIM2Q9P1W9 311 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SCAF8Q9UPN6 1271 aaKnown RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 PLAAQ9Y263 795 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 RRP15Q9Y3B9 282 aaKnown RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 NR2E1Q9Y466 385 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ALG6Q9Y672 507 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SYNGAP1Q96PV0 1343 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 SIP14410 1827 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 MYCLP12524 364 aaPredicted RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 KCNA2P16389 499 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 HSPA6P17066 643 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 MFAP3P55082 362 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 BACE1P56817 501 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 HLTFQ14527 1009 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDPN-212ENST00000621990 SLC39A4Q6P5W5 647 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 TMC3Q7Z5M5 1100 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 DDX42Q86XP3 938 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDPN-212ENST00000621990 EFCAB13Q8IY85 973 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 HELQQ8TDG4 1101 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 KAT5Q92993 513 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 CD101Q93033 1021 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 WNK4Q96J92 1243 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 TMBIM4Q9HC24 238 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 RNF146Q9NTX7 359 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 UTP11Q9Y3A2 253 aaKnown RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 RIPK3Q9Y572 518 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 NFASCO94856 1347 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 LCTP09848 1927 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 ATP2A1O14983 1001 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 DAPK3O43293 454 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 RGS20O76081 388 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 SGPL1O95470 568 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 CYP1A2P05177 515 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 PEX5P50542 639 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 DRG2P55039 364 aaKnown RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 PRPF4BQ13523 1007 aaKnown RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 MTMR3Q13615 1198 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 BAATQ14032 418 aaPredicted RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 DHX34Q14147 1143 aaKnown RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 DUPD1Q68J44 220 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 OTUD6AQ7L8S5 288 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 JDP2Q8WYK2 163 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 BSNDQ8WZ55 320 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 ATG4CQ96DT6 458 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 ZSWIM1Q9BR11 485 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 RAB17Q9H0T7 212 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 SEPT11Q9NVA2 429 aaKnown RBP10.17□□□□□ -0.78
PDPN-212ENST00000621990 TCEAL9Q9UHQ7 104 aa10.17□□□□□ -0.78
PDPN-212ENST00000621990 GOLGA6L10A0A0M3HER8 536 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 DENND3A2RUS2 1198 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 SRRM3A6NNA2 597 aaPredicted RBP10.16□□□□□ -0.78
PDPN-212ENST00000621990 MYO1CO00159 1063 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 ZNF862O60290 1169 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 NR3C2P08235 984 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 GNGT1P63211 74 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 CLDN10P78369 228 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 FMO1Q01740 532 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 NLRX1Q86UT6 975 aa10.16□□□□□ -0.78
PDPN-212ENST00000621990 SLC47A2Q86VL8 602 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms