RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 H3BRB1 525 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CYP26A1O43174 497 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 FGGP02679 453 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 VIL1P09327 827 aaKnown RBP9.87□□□□□ -0.83
GGA3-223ENST00000621870 CDC25BP30305 580 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 RGS7P49802 495 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CNTN2Q02246 1040 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 USP50Q70EL3 339 aaPredicted RBP9.87□□□□□ -0.83
GGA3-223ENST00000621870 EFCAB13Q8IY85 973 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 ARRDC4Q8NCT1 418 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CYP2W1Q8TAV3 490 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 TTC25Q96NG3 672 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 TIPINQ9BVW5 301 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 TUT1Q9H6E5 874 aaKnown RBP9.87□□□□□ -0.83
GGA3-223ENST00000621870 IL17RBQ9NRM6 502 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 ABHD10Q9NUJ1 306 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 MAP3K20Q9NYL2 800 aaKnown RBP9.87□□□□□ -0.83
GGA3-223ENST00000621870 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 C2CD2LO14523 706 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 B3GAT3O94766 335 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CPP00450 1065 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 CALB1P05937 261 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 YY1P25490 414 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 BTBD8Q5XKL5 378 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 VGLL2Q8N8G2 317 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 VPS33BQ9H267 617 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 PDE11AQ9HCR9 933 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 ANKEF1Q9NU02 776 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 DONSONQ9NYP3 566 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 MOSPD1Q9UJG1 213 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 SALL1Q9NSC2 1324 aa9.87□□□□□ -0.83
GGA3-223ENST00000621870 DSG3P32926 999 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ATP1A2P50993 1020 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 TFDP2Q14188 446 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ADSSL1Q8N142 457 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 FAM49BQ9NUQ9 324 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 KLHL8Q9P2G9 620 aaPredicted RBP9.86□□□□□ -0.83
GGA3-223ENST00000621870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
GGA3-223ENST00000621870 VWA5AO00534 786 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 PRRG1O14668 218 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 LCP1P13796 627 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 PTPRAP18433 802 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 GRIK1P39086 918 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ZNF131P52739 623 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ACCSLQ4AC99 568 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 NOP9Q86U38 636 aaKnown RBP9.86□□□□□ -0.83
GGA3-223ENST00000621870 TRPM4Q8TD43 1214 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 PDLIM2Q96JY6 352 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 DHX35Q9H5Z1 703 aaKnown RBP9.86□□□□□ -0.83
GGA3-223ENST00000621870 STARD7Q9NQZ5 370 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ASNSD1Q9NWL6 643 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 FAM198AQ9UFP1 575 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 RSPH10B2B2RC85 870 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 RSPH10BP0C881 870 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 KRT10P13645 584 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 PAN2Q504Q3 1202 aaKnown RBP9.86□□□□□ -0.83
GGA3-223ENST00000621870 FRMD5Q7Z6J6 570 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 TTC39CQ8N584 583 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 DPF3Q92784 378 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 TMEM169Q96HH4 297 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 CABS1Q96KC9 395 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ZNF512Q96ME7 567 aaPredicted RBP9.86□□□□□ -0.83
GGA3-223ENST00000621870 C7orf25Q9BPX7 421 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 RNF208Q9H0X6 261 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 RIOX1Q9H6W3 641 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 CYP26B1Q9NR63 512 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ABCF3Q9NUQ8 709 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 ATP11BQ9Y2G3 1177 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 RICTORQ6R327 1708 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 PPLO60437 1756 aa9.86□□□□□ -0.83
GGA3-223ENST00000621870 C17orf102A2RUQ5 167 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PALMO75781 387 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 RHOBTB3O94955 611 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NPTXRO95502 500 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 SREBF1P36956 1147 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NNMTP40261 264 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 RHBDL3P58872 404 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 ZNF211Q13398 564 aaPredicted RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 FKBP1CQ5VVH2 108 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 SPATA2LQ8IUW3 424 aaPredicted RBP9.85□□□□□ -0.83
GGA3-223ENST00000621870 PDIK1LQ8N165 341 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 APPL2Q8NEU8 664 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PLCB1Q9NQ66 1216 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.85□□□□□ -0.83
GGA3-223ENST00000621870 IGSF9BQ9UPX0 1349 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PITPNM2Q9BZ72 1349 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 VTNP04004 478 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 WEE2P0C1S8 567 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 HSPA6P17066 643 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 ADORA2AP29274 412 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PMLP29590 882 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 GBP1P32455 592 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 CYP2C19P33261 490 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 AP3M2P53677 418 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 PPATQ06203 517 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 BRD3Q15059 726 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 NOTUMQ6P988 496 aa9.85□□□□□ -0.83
GGA3-223ENST00000621870 BZW1Q7L1Q6 419 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms