RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 IGSF21Q96ID5 467 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
CPNE3-210ENST00000621245 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
CPNE3-210ENST00000621245 HES2Q9Y543 173 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 DOCK8Q8NF50 2099 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 TMEM221A6NGB7 291 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 M0R296 226 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 B4GALT5O43286 388 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 ZNF623O75123 536 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 CXCL14O95715 111 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 PDGFBP01127 241 aaPredicted RBP12.76□□□□□ -0.37
CPNE3-210ENST00000621245 POMCP01189 267 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 SSBP05455 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
CPNE3-210ENST00000621245 RFC5P40937 340 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 ZXDAP98168 799 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 KRT17Q04695 432 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 PTPN14Q15678 1187 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 CALCRLQ16602 461 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 RARS2Q5T160 578 aaKnown RBP12.76□□□□□ -0.37
CPNE3-210ENST00000621245 GLB1LQ6UWU2 654 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 TRIM67Q6ZTA4 783 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 MRPL10Q7Z7H8 261 aaKnown RBP12.76□□□□□ -0.37
CPNE3-210ENST00000621245 CDR2LQ86X02 465 aaPredicted RBP12.76□□□□□ -0.37
CPNE3-210ENST00000621245 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 TMEM169Q96HH4 297 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 MTMR9Q96QG7 549 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 HSD17B14Q9BPX1 270 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
CPNE3-210ENST00000621245 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 MARCH6O60337 910 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 CTSAP10619 480 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 XBP1P17861 261 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 TXKP42681 527 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 ALDH7A1P49419 539 aaKnown RBP12.75□□□□□ -0.37
CPNE3-210ENST00000621245 NEK4P51957 841 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 VCPP55072 806 aaKnown RBP12.75□□□□□ -0.37
CPNE3-210ENST00000621245 CDC42EP1Q00587 391 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 MBTD1Q05BQ5 628 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 TAS1R1Q7RTX1 841 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 SRGAP1Q7Z6B7 1085 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 PRSS33Q8NF86 280 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 SLC22A17Q8WUG5 538 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 ASIC4Q96FT7 647 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 ZFP42Q96MM3 310 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 MTRQ99707 1265 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 JPH2Q9BR39 696 aaPredicted RBP12.75□□□□□ -0.37
CPNE3-210ENST00000621245 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
CPNE3-210ENST00000621245 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
CPNE3-210ENST00000621245 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 MIOSQ9NXC5 875 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 IPPQ9Y573 584 aa12.75□□□□□ -0.37
CPNE3-210ENST00000621245 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 NEMFO60524 1076 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 EDN1P05305 212 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 SPATA31C1P0DKV0 1188 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 ATP2B1P20020 1258 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 GLRA2P23416 452 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 ARL2P36404 184 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 MLH1P40692 756 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 RARRES1P49788 294 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 RAB27AP51159 221 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 PTENP60484 403 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 NHLH1Q02575 133 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
CPNE3-210ENST00000621245 PTPN21Q16825 1174 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
CPNE3-210ENST00000621245 CCDC83Q8IWF9 413 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 SLFN12Q8IYM2 578 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 WASF1Q92558 559 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 CASP10Q92851 521 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 INO80BQ9C086 356 aaPredicted RBP12.74□□□□□ -0.37
CPNE3-210ENST00000621245 CXCL16Q9H2A7 254 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 PCDHA12Q9UN75 941 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 USP20Q9Y2K6 914 aa12.74□□□□□ -0.37
CPNE3-210ENST00000621245 INO80B-WBP1J3KQ70 363 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 NRP1O14786 923 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 DKC1O60832 514 aaKnown RBP eCLIP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 LILRB3O75022 631 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 MED24O75448 989 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 LYPLA2O95372 231 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 ASGR2P07307 311 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 MYBP10242 640 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 SKIP12755 728 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 ARF4P18085 180 aaPredicted RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 MCM7P33993 719 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 SCNN1GP51170 649 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 ALYREFQ86V81 257 aaKnown RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 TCP11Q8WWU5 503 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 BSNDQ8WZ55 320 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms