RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 TCP11Q8WWU5 503 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 CDHR1Q96JP9 859 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 SPATA33Q96N06 139 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 DAAM1Q9Y4D1 1078 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 TTI1O43156 1089 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 CYP26A1O43174 497 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 RAD51CO43502 376 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 TXNP10599 105 aaKnown RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 CCNA1P78396 465 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 KRT76Q01546 638 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 HP1BP3Q5SSJ5 553 aaPredicted RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 ZNF571Q7Z3V5 609 aaPredicted RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 NLRP7Q8WX94 980 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 ARHGEF2Q92974 986 aaKnown RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 DNAJC19Q96DA6 116 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 IWS1Q96ST2 819 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 TSC22D3Q99576 134 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 PI4K2AQ9BTU6 479 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 MLXIPLQ9NP71 852 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 ACP6Q9NPH0 428 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 ZNF302Q9NR11 478 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 TBK1Q9UHD2 729 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 PDXKO00764 312 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 SART1O43290 800 aaKnown RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 PON1P27169 355 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 RASSF2P50749 326 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 KIAA1755Q5JYT7 1200 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 KLHDC7AQ5VTJ3 777 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 FAM160B1Q5W0V3 765 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 DENND2CQ68D51 928 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 FOXR1Q6PIV2 292 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 C2orf69Q8N8R5 385 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 SYT2Q8N9I0 419 aaPredicted RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 GMCL1P1Q8NEA9 526 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 NT5C1BQ96P26 610 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 RAB3IPQ96QF0 476 aaPredicted RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 POP1Q99575 1024 aaKnown RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 POLR3FQ9H1D9 316 aaPredicted RBP9.74□□□□□ -0.85
GGA3-222ENST00000621217 PKD1L3Q7Z443 1732 aa9.74□□□□□ -0.85
GGA3-222ENST00000621217 IRF6O14896 467 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 EPHX2P34913 555 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 FMO5P49326 533 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 CEP120Q8N960 986 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 XXYLT1Q8NBI6 393 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 HAUS1Q96CS2 278 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 BTBD6Q96KE9 485 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 MMP19Q99542 508 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 SIK3Q9Y2K2 1263 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 RIPK3Q9Y572 518 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 CIB2O75838 187 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 ELF1P32519 619 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 VAMP7P51809 220 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 ORC2Q13416 577 aaPredicted RBP9.73□□□□□ -0.85
GGA3-222ENST00000621217 HIBCHQ6NVY1 386 aaPredicted RBP9.73□□□□□ -0.85
GGA3-222ENST00000621217 TAOK1Q7L7X3 1001 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 SLC35G2Q8TBE7 412 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 CBWD1Q9BRT8 395 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 MSTO1Q9BUK6 570 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 CELF2O95319 508 aaKnown RBP9.73□□□□□ -0.85
GGA3-222ENST00000621217 CALCAP01258 141 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 GLI1P08151 1106 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 ADCY8P40145 1251 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 VGLL4Q14135 290 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 LRRC55Q6ZSA7 311 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 FRMD5Q7Z6J6 570 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 TRIM59Q8IWR1 403 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 RNF149Q8NC42 400 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 MCUR1Q96AQ8 359 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 ARL8AQ96BM9 186 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 P2RX7Q99572 595 aaKnown RBP9.73□□□□□ -0.85
GGA3-222ENST00000621217 PDCD2LQ9BRP1 358 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 GPRC5DQ9NZD1 345 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 NAGPAQ9UK23 515 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 PCDHB4Q9Y5E5 795 aa9.73□□□□□ -0.85
GGA3-222ENST00000621217 SSU72P8A0A1W2PR75 194 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 VWA5AO00534 786 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 RGS16O15492 202 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 PTPRAP18433 802 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 NR1D1P20393 614 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 STAT5BP51692 787 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 HUNKP57058 714 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 PRKCEQ02156 737 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 IFRD2Q12894 506 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 MTM1Q13496 603 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 BRDTQ58F21 947 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 PHLDB3Q6NSJ2 640 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 TATDN1Q6P1N9 297 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 MSANTD4Q8NCY6 345 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 TLR10Q9BXR5 811 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 SALL4Q9UJQ4 1053 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 CD2APQ9Y5K6 639 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 CCL15-CCL14A0A0B4J2E2 113 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 GOLGA8SH3BPF8 625 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 ATP9AO75110 1047 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 ACSL3O95573 720 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms