RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, human

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-213	ENST00000619396	COPB2	P35606	906 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	PADI6	Q6TGC4	694 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	MICALCL	Q6ZW33	695 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	ARHGEF19	Q8IW93	802 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	TRIM31	Q9BZY9	425 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	LRRC4C	Q9HCJ2	640 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	UBE2T	Q9NPD8	197 aa	Predicted RBP	32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	ZHX2	Q9Y6X8	837 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	MYCL	P12524	364 aa	Predicted RBP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	PPP2R2A	P63151	447 aa		32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	MCF2L2	Q86YR7	1114 aa		32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	FMO2	Q99518	471 aa		32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	BCCIP	Q9P287	314 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	CNOT7	Q9UIV1	285 aa	Known RBP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	NOVA2	Q9UNW9	492 aa	Known RBP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	KRT13	P13646	458 aa		32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	PPP3CA	Q08209	521 aa		32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	INTS8	Q75QN2	995 aa	Known RBP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	ZKSCAN4	Q969J2	545 aa	Predicted RBP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	PPAN	Q9NQ55	473 aa	Known RBP	32.41	■■■□□ 2.78
KHSRP-213	ENST00000619396	FAM187A	A6NFU0	413 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396		K7ENM7	598 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	MTMR1	Q13613	665 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	C1orf220	Q5T0J3	134 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	PCNX4	Q63HM2	1172 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	C11orf63	Q6NUN7	778 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	ADAT2	Q7Z6V5	191 aa	Known RBP	32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	OTUD6B	Q8N6M0	293 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	NEK9	Q8TD19	979 aa		32.4	■■■□□ 2.78
KHSRP-213	ENST00000619396	TISP43	B9A030	160 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	KIAA0754	O94854	1291 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	FNTA	P49354	379 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	CLUL1	Q15846	466 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	EPC2	Q52LR7	807 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	GLG1	Q92896	1179 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	VTI1A	Q96AJ9	217 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	PCIF1	Q9H4Z3	704 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	TMOD4	Q9NZQ9	345 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	RIPK3	Q9Y572	518 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	GOLGA6L10	A0A0M3HER8	536 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	DCDC2C	A8MYV0	355 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	P4HA2	O15460	535 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	TRAPPC3	O43617	180 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	ATP9A	O75110	1047 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	FTL	P02792	175 aa	Predicted RBP	32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	MAPT	P10636	758 aa	Known RBP	32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	VAMP7	P51809	220 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	DHX34	Q14147	1143 aa	Known RBP	32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	PGM5	Q15124	567 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	C12orf56	Q8IXR9	622 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	ATG4C	Q96DT6	458 aa		32.39	■■■□□ 2.78
KHSRP-213	ENST00000619396	GMNC	A6NCL1	334 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	TMOD1	P28289	359 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	UGCG	Q16739	394 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	C6orf89	Q6UWU4	347 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	C3orf20	Q8ND61	904 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	EPB41L4B	Q9H329	900 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	TMEM206	Q9H813	350 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	P4HB	P07237	508 aa	Known RBP	32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	PAEP	P09466	180 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	DRG2	P55039	364 aa	Known RBP	32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	NSMF	Q6X4W1	530 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	ATP8A1	Q9Y2Q0	1164 aa		32.38	■■■□□ 2.77
KHSRP-213	ENST00000619396	LOXHD1	Q8IVV2	1947 aa		32.37	■■■□□ 2.77
KHSRP-213	ENST00000619396	FSBP	O95073	299 aa		32.37	■■■□□ 2.77
KHSRP-213	ENST00000619396	EIF3B	P55884	814 aa	Known RBP	32.37	■■■□□ 2.77
KHSRP-213	ENST00000619396	AADACL2	Q6P093	401 aa		32.37	■■■□□ 2.77
KHSRP-213	ENST00000619396	CYFIP2	Q96F07	1278 aa		32.37	■■■□□ 2.77
KHSRP-213	ENST00000619396	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	32.37	■■■□□ 2.77	4e-6	■■□□□ 14.4
KHSRP-213	ENST00000619396	PFAS	O15067	1338 aa		32.37	■■■□□ 2.77
KHSRP-213	ENST00000619396	MIF4GD	A9UHW6	222 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	PTGIR	P43119	386 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	MAGOH	P61326	146 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	GHRHR	Q02643	423 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	ALCAM	Q13740	583 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	KRT71	Q3SY84	523 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	JAML	Q86YT9	394 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	MAGOHB	Q96A72	148 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	TLCD1	Q96CP7	247 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	CBWD1	Q9BRT8	395 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	LARS	Q9P2J5	1176 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	KIAA0391	O15091	583 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	RPS12	P25398	132 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	ODF2	Q5BJF6	829 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	ZDHHC24	Q6UX98	284 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	RPUSD2	Q8IZ73	545 aa	Known RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	PLEKHO2	Q8TD55	490 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	KRT35	Q92764	455 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	ACCS	Q96QU6	501 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	CTTNBP2NL	Q9P2B4	639 aa		32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.36	■■■□□ 2.77
KHSRP-213	ENST00000619396	GCLM	P48507	274 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	GPC5	P78333	572 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	MMS22L	Q6ZRQ5	1243 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	RMDN3	Q96TC7	470 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	RARRES1	P49788	294 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	CETN1	Q12798	172 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	NIPA1	Q7RTP0	329 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	PCDHB18P	Q96TA0	734 aa		32.35	■■■□□ 2.77
KHSRP-213	ENST00000619396	VWA5A	O00534	786 aa		32.34	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms