RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 CYP4A22Q5TCH4 519 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 ZNF564Q8TBZ8 553 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 MAK16Q9BXY0 300 aaKnown RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 VWA5AO00534 786 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TLR2O60603 784 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 H2AFXP16104 143 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 GBP2P32456 591 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 PSMC4P43686 418 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 SEC24CP53992 1094 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 KRT39Q6A163 491 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 ARHGEF26Q96DR7 871 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 HEXIM2Q96MH2 286 aaKnown RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 IWS1Q96ST2 819 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TMEM117Q9H0C3 514 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 C10orf88Q9H8K7 445 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 A1CFQ9NQ94 594 aaKnown RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 IRF6O14896 467 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 PGM5Q15124 567 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 CEP57Q86XR8 500 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 CCDC60Q8IWA6 550 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 CCDC63Q8NA47 563 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 FBXL13Q8NEE6 735 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 AGPAT1Q99943 283 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TLR10Q9BXR5 811 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 EFCC1Q9HA90 598 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 ALG6Q9Y672 507 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 SLIT2O94813 1529 aa15.91■□□□□ 0.14
TNFRSF11A-206ENST00000617039 RGS16O15492 202 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 KCNT1Q5JUK3 1230 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 CPNE8Q86YQ8 564 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 ARL8AQ96BM9 186 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 SNED1Q8TER0 1413 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 SGK1O00141 431 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TRIM66O15016 1216 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 PLS3P13797 630 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 COMTP21964 271 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 IREB2P48200 963 aaKnown RBP15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 IFT88Q13099 833 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 BEND6Q5SZJ8 279 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 MMS22LQ6ZRQ5 1243 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 BZW2Q9Y6E2 419 aaKnown RBP15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 SMARCA1P28370 1054 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TCF7P36402 384 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 MNAT1P51948 309 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TRAPPC11Q7Z392 1133 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 TUFT1Q9NNX1 390 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 SEPT10Q9P0V9 454 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 FBXL5Q9UKA1 691 aa15.9■□□□□ 0.14
TNFRSF11A-206ENST00000617039 M0R2N6 131 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 VTNP04004 478 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 VIL1P09327 827 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 CTSHP09668 335 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 SCP2P22307 547 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 RDXP35241 583 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 HDLBPQ00341 1268 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 IKBKGQ9Y6K9 419 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 MYH10P35580 1976 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 TGFB1I1O43294 461 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 CTNND1O60716 968 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 DKC1O60832 514 aaKnown RBP eCLIP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 MARCKSL1P49006 195 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 IRX4P78413 519 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 TUBB2AQ13885 445 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 MAPK6Q16659 721 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 MCTP2Q6DN12 878 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 TATDN1Q6P1N9 297 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 FOXR1Q6PIV2 292 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 TUBB2BQ9BVA1 445 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 MOV10L1Q9BXT6 1211 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 PXMP2Q9NR77 195 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 KLK14Q9P0G3 267 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 AJAP1Q9UKB5 411 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.131e-9■■■■□ 24.4
TNFRSF11A-206ENST00000617039 SNHG28P0DPA3 235 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 RAP1GAPP47736 663 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 MRPS9P82933 396 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 FSTL1Q12841 308 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 PPFIA1Q13136 1202 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 EMC2Q15006 297 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 CCNI2Q6ZMN8 369 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 GMCL1P1Q8NEA9 526 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 RAB20Q9NX57 234 aa15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 PARP4Q9UKK3 1724 aaKnown RBP15.89■□□□□ 0.13
TNFRSF11A-206ENST00000617039 GRID2IPA4D2P6 1211 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 PDGFRBP09619 1106 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 KRT10P13645 584 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 SAT1P21673 171 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 GNA15P30679 374 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 PBX1P40424 430 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 EPHB4P54760 987 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 GPC5P78333 572 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 OR6B2Q6IFH4 312 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 SV2AQ7L0J3 742 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 SCYL3Q8IZE3 742 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 CEP120Q8N960 986 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 FMO2Q99518 471 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 FAM49BQ9NUQ9 324 aa15.88■□□□□ 0.13
TNFRSF11A-206ENST00000617039 HEY1Q9Y5J3 304 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms