RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 EIF4BP23588 611 aaKnown RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 CYP2J2P51589 502 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 ZNF75DP51815 510 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 CRYBB1P53674 252 aaPredicted RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 MRPS6P82932 125 aaKnown RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 MGAT3Q09327 533 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 SNX17Q15036 470 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 TRIM59Q8IWR1 403 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 GCOM2Q9BZD3 368 aaPredicted RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 XPO4Q9C0E2 1151 aaKnown RBP16.59■□□□□ 0.25
CBWD1-225ENST00000616944 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
CBWD1-225ENST00000616944 RALGAPA2Q2PPJ7 1873 aa16.58■□□□□ 0.25
CBWD1-225ENST00000616944 A0A0B4J269 797 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 MAPK13O15264 365 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 TSPAN1O60635 241 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 SERPINC1P01008 464 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 COPB1P53618 953 aaKnown RBP16.58■□□□□ 0.24
CBWD1-225ENST00000616944 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.24
CBWD1-225ENST00000616944 MIIPQ5JXC2 388 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 FRMD5Q7Z6J6 570 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 RSPH3Q86UC2 560 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 FAM126BQ8IXS8 530 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 ANKLE1Q8NAG6 615 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 XXYLT1Q8NBI6 393 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 MRFAP1L1Q96HT8 127 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 PDLIM2Q96JY6 352 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 SCLT1Q96NL6 688 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 TUBGCP2Q9BSJ2 902 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 CELF4Q9BZC1 486 aaKnown RBP16.58■□□□□ 0.24
CBWD1-225ENST00000616944 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
CBWD1-225ENST00000616944 TRPV6Q9H1D0 765 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.24
CBWD1-225ENST00000616944 MAGEC2Q9UBF1 373 aaPredicted RBP16.58■□□□□ 0.24
CBWD1-225ENST00000616944 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
CBWD1-225ENST00000616944 FAM189A1O60320 539 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 EXOC3O60645 756 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 CHRNA1P02708 482 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
CBWD1-225ENST00000616944 UBASH3AP57075 661 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 ATF7IP2Q5U623 682 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 SLFN12LQ6IEE8 588 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 POMGNT1Q8WZA1 660 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 TAB2Q9NYJ8 693 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 GINS2Q9Y248 185 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 TNFSF13BQ9Y275 285 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 TRPV2Q9Y5S1 764 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 CDY2AQ9Y6F7 541 aa16.57■□□□□ 0.24
CBWD1-225ENST00000616944 PDCD11Q14690 1871 aaKnown RBP16.57■□□□□ 0.24
CBWD1-225ENST00000616944 CAND2O75155 1236 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 CD4P01730 458 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 ARF4P18085 180 aaPredicted RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 MCL1Q07820 350 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 RBL2Q08999 1139 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 NR1I3Q14994 352 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 FAM186BQ8IYM0 893 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 ANKRD20A12PQ8NF67 263 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 ANKFY1Q9P2R3 1169 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 ADRB2P07550 413 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 FGFR4P22455 802 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 HOXA11P31270 313 aaPredicted RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 C1orf53Q5VUE5 145 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 EEF1DP3Q658K8 133 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 MPZL3Q6UWV2 235 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 GPD1LQ8N335 351 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 DIS3LQ8TF46 1054 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 SAAL1Q96ER3 474 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 PDZD7Q9H5P4 517 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 METTL14Q9HCE5 456 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 AGO2Q9UKV8 859 aaKnown RBP16.56■□□□□ 0.24
CBWD1-225ENST00000616944 NOD1Q9Y239 953 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 FRMD4BQ9Y2L6 1034 aa16.56■□□□□ 0.24
CBWD1-225ENST00000616944 A0A1B0GUA9 196 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 M0QZ92 97 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 CLDN3O15551 220 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 CBFA2T2O43439 604 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 ERLIN2O94905 339 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
CBWD1-225ENST00000616944 CDC25BP30305 580 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 THPOP40225 353 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 PBX1P40424 430 aa16.55■□□□□ 0.24
CBWD1-225ENST00000616944 NOLC1Q14978 699 aaKnown RBP eCLIP16.55■□□□□ 0.24
CBWD1-225ENST00000616944 SNRNP35Q16560 246 aaKnown RBP16.55■□□□□ 0.24
CBWD1-225ENST00000616944 TRAF7Q6Q0C0 670 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms