RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 KIAA0753Q2KHM9 967 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 CYB5D1Q6P9G0 228 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 CCDC60Q8IWA6 550 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 TRIM58Q8NG06 486 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 ZNF473Q8WTR7 871 aaKnown RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 SYN2Q92777 582 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 TATDN2Q93075 761 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 C12orf42Q96LP6 360 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 TEX13BQ9BXU2 312 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 LARSQ9P2J5 1176 aaKnown RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 CCND2P30279 289 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 SEC24CP53992 1094 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 PSMC5P62195 406 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 ADCY2Q08462 1091 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 HAUS6Q7Z4H7 955 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 NLRX1Q86UT6 975 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 CREG2Q8IUH2 290 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 RRAGCQ9HB90 399 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 TMOD4Q9NZQ9 345 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 TPX2Q9ULW0 747 aaKnown RBP12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 SNX12Q9UMY4 172 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 FRMD4BQ9Y2L6 1034 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 ADGRA3Q8IWK6 1321 aa12.34□□□□□ -0.43
PCDHGA9-202ENST00000616887 PJA2O43164 708 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 PALMO75781 387 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 LSP1P33241 339 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 JAM2P57087 298 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 PPP3CAQ08209 521 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 BFSP1Q12934 665 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 SWSAP1Q6NVH7 229 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 C4orf19Q8IY42 314 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 FUKQ8N0W3 1084 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 AENQ8WTP8 325 aaKnown RBP12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 SPDL1Q96EA4 605 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 SAAL1Q96ER3 474 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 RUFY1Q96T51 708 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 SH3GL3Q99963 347 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 TLR10Q9BXR5 811 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 GPR88Q9GZN0 384 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 EPN3Q9H201 632 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 ETAA1Q9NY74 926 aa12.33□□□□□ -0.43
PCDHGA9-202ENST00000616887 SCN4AP35499 1836 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 PFASO15067 1338 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 ANKRD33BA6NCL7 494 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCDC169A6NNP5 214 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 AP1G2O75843 785 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 MATR3P43243 847 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 SSR1P43307 286 aaKnown RBP12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 GCLMP48507 274 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 ARHGAP44Q17R89 818 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 OLIG1Q8TAK6 271 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 NSUN6Q8TEA1 469 aaKnown RBP12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 CLMNQ96JQ2 1002 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 MOV10L1Q9BXT6 1211 aaKnown RBP12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 ACAD9Q9H845 621 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
PCDHGA9-202ENST00000616887 ANO9A1A5B4 782 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 IQCA1LA6NCM1 817 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 ANKRD63C9JTQ0 380 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 EVI5O60447 810 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 ADRB2P07550 413 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 ADSSP30520 456 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 KRT76Q01546 638 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 PALB2Q86YC2 1186 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 PARD3BQ8TEW8 1205 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 KAT5Q92993 513 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 CEP170P1Q96L14 293 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 OSBPL9Q96SU4 736 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 HAUS2Q9NVX0 235 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 MAP3K20Q9NYL2 800 aaKnown RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 HSPBP1Q9NZL4 362 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 DNAJC12Q9UKB3 198 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 PCDHA10Q9Y5I2 948 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 UBE4BO95155 1302 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 A6NNZ2 444 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 F8VZ95 297 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 LYPLA2O95372 231 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 EPHX2P34913 555 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 NPTX2P47972 431 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 JAK3P52333 1124 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms