RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 CRAMP1Q96RY5 1269 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 FARP1Q9Y4F1 1045 aaPredicted RBP18.82■□□□□ 0.6
ATXN2-227ENST00000616825 ACTR2P61160 394 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 POU5F1BQ06416 359 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 SF3B3Q15393 1217 aaKnown RBP18.82■□□□□ 0.6
ATXN2-227ENST00000616825 WDR72Q3MJ13 1102 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 ATG9AQ7Z3C6 839 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 TEX2Q8IWB9 1127 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 TBC1D16Q8TBP0 767 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 AFG1LQ8WV93 481 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 LPAR1Q92633 364 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 NRBF2Q96F24 287 aa18.82■□□□□ 0.6
ATXN2-227ENST00000616825 DDX56Q9NY93 547 aaKnown RBP18.82■□□□□ 0.6
ATXN2-227ENST00000616825 HIPK4Q8NE63 616 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 THOC1Q96FV9 657 aaKnown RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 DAGLAQ9Y4D2 1042 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 MOCS2O96007 188 aaPredicted RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 CDH6P55285 790 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 SUDS3Q9H7L9 328 aaPredicted RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 ZFXP17010 805 aaPredicted RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 PMS2P54278 862 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 EXOSC10Q01780 885 aaKnown RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 TAP1Q03518 808 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 VEPH1Q14D04 833 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 CDKL3Q8IVW4 592 aaPredicted RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 ATP11CQ8NB49 1132 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 SNX19Q92543 992 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 TRIM4Q9C037 500 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 ESYT3A0FGR9 886 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 H3BRJ5 948 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 NDUFB10O96000 172 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 MAGOHP61326 146 aaKnown RBP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 NSUN2Q08J23 767 aaKnown RBP eCLIP18.81■□□□□ 0.6
ATXN2-227ENST00000616825 TIPINQ9BVW5 301 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 PLA2G12BQ9BX93 195 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
ATXN2-227ENST00000616825 GRID2IPA4D2P6 1211 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 ZBBXA8MT70 800 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 TNPO2O14787 897 aaKnown RBP18.8■□□□□ 0.6
ATXN2-227ENST00000616825 ADORA2BP29275 332 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 HABP4Q5JVS0 413 aaKnown RBP18.8■□□□□ 0.6
ATXN2-227ENST00000616825 PIP4K2CQ8TBX8 421 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 INTUQ9ULD6 942 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 NMT1P30419 496 aaKnown RBP18.8■□□□□ 0.6
ATXN2-227ENST00000616825 DEUP1Q05D60 604 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 FOXN1O15353 648 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 BTBD8Q5XKL5 378 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 CC2D1AQ6P1N0 951 aaPredicted RBP18.8■□□□□ 0.6
ATXN2-227ENST00000616825 CCDC137Q6PK04 289 aaKnown RBP18.8■□□□□ 0.6
ATXN2-227ENST00000616825 TAF1DQ9H5J8 278 aaPredicted RBP18.8■□□□□ 0.6
ATXN2-227ENST00000616825 PARVAQ9NVD7 372 aa18.8■□□□□ 0.6
ATXN2-227ENST00000616825 ATP5HO75947 161 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 CPB1P15086 417 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 YWHABP31946 246 aaKnown RBP18.79■□□□□ 0.6
ATXN2-227ENST00000616825 SBK1Q52WX2 424 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 PID1Q7Z2X4 250 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 KRT14P02533 472 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 SCP2P22307 547 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 CDK17Q00537 523 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 PDIA2Q13087 525 aaKnown RBP18.79■□□□□ 0.6
ATXN2-227ENST00000616825 BAATQ14032 418 aaPredicted RBP18.79■□□□□ 0.6
ATXN2-227ENST00000616825 ANKRD40Q6AI12 368 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 CAPN11Q9UMQ6 739 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 ASAP2O43150 1006 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 HSD17B4P51659 736 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 ARHGDIAP52565 204 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 NME3Q13232 169 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 CYTH2Q99418 400 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 TRIM15Q9C019 465 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 SP110Q9HB58 689 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 SARS2Q9NP81 518 aaKnown RBP18.79■□□□□ 0.6
ATXN2-227ENST00000616825 NYAP2Q9P242 653 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 PRDM4Q9UKN5 801 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 PLA2R1Q13018 1463 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 NCK2O43639 380 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 TADA3O75528 432 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 TYK2P29597 1187 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 GUCY1A2P33402 732 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 ROR1Q01973 937 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 PDXDC1Q6P996 788 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 L3MBTL1Q9Y468 752 aa18.79■□□□□ 0.6
ATXN2-227ENST00000616825 KIF28PB7ZC32 967 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 TRAPPC3O43617 180 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 ENTPD3O75355 529 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 GGPS1O95749 300 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 PYGBP11216 843 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 CCDC144BQ3MJ40 725 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 SEPT1Q8WYJ6 367 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 NCLNQ969V3 563 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 E5RI56 91 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 PRKCBP05771 671 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 HDLBPQ00341 1268 aaKnown RBP18.78■□□□□ 0.6
ATXN2-227ENST00000616825 C18orf8Q96DM3 657 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 E2F6O75461 281 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 CDC42EP1Q00587 391 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 IMPG1Q17R60 797 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 PIDD1Q9HB75 910 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms