RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TEDDM1Q5T9Z0 273 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 PTRHD1Q6GMV3 140 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 TUBGCP3Q96CW5 907 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 TRMT44Q8IYL2 757 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 TNFSF13BQ9Y275 285 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
TCF4-248ENST00000616053 GOLGA8IPA6NC78 632 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 H0Y626 953 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 NDUFS3O75489 264 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 FKBP9O95302 570 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 TRIM16O95361 564 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 FBLN1P23142 703 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 TMEM154Q6P9G4 183 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 GLB1LQ6UWU2 654 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 FKBP9P1Q75LS8 142 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 ITIH6Q6UXX5 1313 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 A8MXQ7 604 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 ACSL4O60488 711 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 CENPUQ71F23 418 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 SCAIQ8N9R8 606 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 MTX1Q13505 466 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 MRPL48Q96GC5 212 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 VTI1BQ9UEU0 232 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 F8W810 466 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 ST13P50502 369 aaKnown RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 CNTN1Q12860 1018 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 CAMK2GQ13555 558 aaPredicted RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 NAA30Q147X3 362 aaPredicted RBP13.37□□□□□ -0.27
TCF4-248ENST00000616053 IER5Q5VY09 327 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 ANGPTL2Q9UKU9 493 aa13.37□□□□□ -0.27
TCF4-248ENST00000616053 KLHL18O94889 574 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 GPC1P35052 558 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 EML4Q9HC35 981 aaKnown RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ADCY3O60266 1144 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 CYP2B6P20813 491 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 PDIA6Q15084 440 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 PREPLQ4J6C6 727 aaPredicted RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 RSPH9Q9H1X1 276 aaPredicted RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 NCKAP1Q9Y2A7 1128 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 PCYT1AP49585 367 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 MXI1P50539 228 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 PSMC5P62195 406 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 CDH18Q13634 790 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ST13P4Q8IZP2 240 aaPredicted RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 CYTH2Q99418 400 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 GINS4Q9BRT9 223 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 TUBB6Q9BUF5 446 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ACAP2Q15057 778 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ESRRAP11474 423 aaPredicted RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 PDX1P52945 283 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 NAALADL2Q58DX5 795 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 KRT40Q6A162 431 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
TCF4-248ENST00000616053 STON1Q9Y6Q2 735 aa13.36□□□□□ -0.27
TCF4-248ENST00000616053 BBOX1O75936 387 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 SERPINB3P29508 390 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 ARL3P36405 182 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 C11orf88Q6PI97 169 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 RBM7Q9Y580 266 aaKnown RBP13.35□□□□□ -0.27
TCF4-248ENST00000616053 RGS5O15539 181 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 KRT37O76014 449 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 TJP3O95049 919 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 SDC4P31431 198 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 C6orf10Q5SRN2 563 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 DPP10Q8N608 796 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 FAR2Q96K12 515 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 CHURC1-FNTBB4DL54 471 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 LCP1P13796 627 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 PHKA1P46020 1223 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 ATP12AP54707 1039 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 FCGRTP55899 365 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 HUNKP57058 714 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 TMPRSS15P98073 1019 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 TGM3Q08188 693 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 KYNUQ16719 465 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 SV2CQ496J9 727 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 HEATR6Q6AI08 1181 aaKnown RBP13.35□□□□□ -0.27
TCF4-248ENST00000616053 APOBEC2Q9Y235 224 aaKnown RBP13.35□□□□□ -0.27
TCF4-248ENST00000616053 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 ASB14A6NK59 587 aa13.35□□□□□ -0.27
TCF4-248ENST00000616053 EGFRP00533 1210 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms