RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 LAMB3Q13751 1172 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 CCDC38Q502W7 563 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 CNNM4Q6P4Q7 775 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 MAMDC4Q6UXC1 1216 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 MYCBPAPQ8TBZ2 947 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 ALS2CR12Q96Q35 445 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 CCT8L2Q96SF2 557 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.14□□□□□ -0.15
FOXN3-219ENST00000615335 DOCK5Q9H7D0 1870 aa14.14□□□□□ -0.15
FOXN3-219ENST00000615335 ZSWIM8A7E2V4 1837 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 DNAJC8O75937 253 aaPredicted RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 TGFB3P10600 412 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 PAPOLAP51003 745 aaKnown RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 SP4Q02446 784 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 FKBP15Q5T1M5 1219 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 USP6NLQ92738 828 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 EZH1Q92800 747 aaPredicted RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 MMS19Q96T76 1030 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 BCAS3Q9H6U6 928 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 HAUS2Q9NVX0 235 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 SRGAP2O75044 1071 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 LUC7L3O95232 432 aaKnown RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 ATP6V1G2O95670 118 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 HOXC6P09630 235 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 CYP4A11Q02928 519 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 LY6KQ17RY6 165 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 FIGNQ5HY92 759 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 MIIPQ5JXC2 388 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 CYFIP1Q7L576 1253 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 SPATA21Q7Z572 469 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 SDCCAG8Q86SQ7 713 aaPredicted RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 ERGIC2Q96RQ1 377 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 EIF2AK1Q9BQI3 630 aaKnown RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 BEGAINQ9BUH8 593 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
FOXN3-219ENST00000615335 PDGFCQ9NRA1 345 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
FOXN3-219ENST00000615335 A0A1W2PQJ5 194 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 SNAI1O95863 264 aaPredicted RBP14.12□□□□□ -0.15
FOXN3-219ENST00000615335 SSBP05455 408 aaKnown RBP eCLIP14.12□□□□□ -0.15
FOXN3-219ENST00000615335 CDK17Q00537 523 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 KRT76Q01546 638 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 GRB10Q13322 594 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 RIPK1Q13546 671 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 ECM1Q16610 540 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 CCL14Q16627 93 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 COBLL1Q53SF7 1204 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 THEMIS2Q5TEJ8 643 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 B3GNT9Q6UX72 402 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 ZFAND2BQ8WV99 257 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 APBA2Q99767 749 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 SENP7Q9BQF6 1050 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 LACRTQ9GZZ8 138 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 NOD2Q9HC29 1040 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 VTA1Q9NP79 307 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 KIAA1024Q9UPX6 916 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 PCDHGC5Q9Y5F6 944 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 THSD7BQ9C0I4 1608 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 NFASCO94856 1347 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 SYNGAP1Q96PV0 1343 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 KDM3AQ9Y4C1 1321 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 RCCD1A6NED2 376 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 GPR25O00155 361 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 MED24O75448 989 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 TXNP10599 105 aaKnown RBP14.12□□□□□ -0.15
FOXN3-219ENST00000615335 GHRP10912 638 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 UBA1P22314 1058 aaKnown RBP14.12□□□□□ -0.15
FOXN3-219ENST00000615335 TTLL4Q14679 1199 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 TTMPQ5BVD1 217 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 SV2BQ7L1I2 683 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 IQCDQ96DY2 449 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 CAPZA3Q96KX2 299 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 PNMA5Q96PV4 448 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 NT5C3AQ9H0P0 336 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 ABHD16BQ9H3Z7 469 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 FLRT1Q9NZU1 646 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 SLC9A2Q9UBY0 812 aa14.12□□□□□ -0.15
FOXN3-219ENST00000615335 ANO9A1A5B4 782 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 ARIH2O95376 493 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 CCNE2O96020 404 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 RPA1P27694 616 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 FLT3LGP49771 235 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 EPHA7Q15375 998 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 EMBQ6PCB8 327 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 SND1Q7KZF4 910 aaKnown RBP eCLIP14.11□□□□□ -0.15
FOXN3-219ENST00000615335 TPH2Q8IWU9 490 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 C1orf131Q8NDD1 294 aaKnown RBP14.11□□□□□ -0.15
FOXN3-219ENST00000615335 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 SCFD2Q8WU76 684 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 TSGA10Q9BZW7 698 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 SAGE1Q9NXZ1 904 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 GABRQQ9UN88 632 aa14.11□□□□□ -0.15
FOXN3-219ENST00000615335 WDR64B1ANS9 1081 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms