RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 IL4RP24394 825 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 MATR3P43243 847 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS11-206ENST00000614944 ITGB3BPQ13352 177 aaPredicted RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 DHX40Q8IX18 779 aaKnown RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 SLC15A3Q8IY34 581 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 SLC7A5P1Q8MH63 180 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS11-206ENST00000614944 EMID1Q96A84 441 aaPredicted RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 TBC1D31Q96DN5 1066 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 ANKEF1Q9NU02 776 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 QPCTLQ9NXS2 382 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 UBE4BO95155 1302 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 WDR64B1ANS9 1081 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 MED24O75448 989 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 SLITRK3O94933 977 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 ENPP1P22413 925 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 ZNF165P49910 485 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 ZNF132P52740 706 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 CYB5D1Q6P9G0 228 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 GABPB2Q8TAK5 448 aaPredicted RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 CYP2W1Q8TAV3 490 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 ZMAT2Q96NC0 199 aaKnown RBP9.51□□□□□ -0.89
VPS11-206ENST00000614944 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 ATXN10Q9UBB4 475 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 TMED5Q9Y3A6 229 aa9.51□□□□□ -0.89
VPS11-206ENST00000614944 A6NHS1 94 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 BUB1BO60566 1050 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 LDHAP00338 332 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 BMP6P22004 513 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ETF1P62495 437 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■□□□ 13.5
VPS11-206ENST00000614944 Q3C1V9 767 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 C17orf99Q6UX52 265 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 WDR75Q8IWA0 830 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 TMCO5AQ8N6Q1 288 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 LZICQ8WZA0 190 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 USP6NLQ92738 828 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 DHTKD1Q96HY7 919 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 ZNF408Q9H9D4 720 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 RWDD2AQ9UIY3 292 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 IGSF9BQ9UPX0 1349 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ATP9BO43861 1147 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 RNF40O75150 1001 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ZNF157P51786 506 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 OXCT1P55809 520 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 PHEXP78562 749 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ECM1Q16610 540 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ACCSLQ4AC99 568 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 BEND6Q5SZJ8 279 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 MORN1Q5T089 497 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 APLFQ8IW19 511 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 NOC3LQ8WTT2 800 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 MPP4Q96JB8 637 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 CCDC68Q9H2F9 335 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ZSWIM4Q9H7M6 989 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 HOMER2Q9NSB8 354 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 TCEAL9Q9UHQ7 104 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 ZSWIM8A7E2V4 1837 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 EML1O00423 815 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 TMCC1O94876 653 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 PLA2G4BP0C869 781 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 GAP43P17677 238 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 IRAK1P51617 712 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 CCZ1BP86790 482 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 CCZ1P86791 482 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 EIF2B5Q13144 721 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 BLMHQ13867 455 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 PLS1Q14651 629 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 NCAPHQ15003 741 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 PABPC1LQ4VXU2 614 aaKnown RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 EMC10Q5UCC4 262 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 C11orf57Q6ZUT1 292 aaPredicted RBP9.5□□□□□ -0.89
VPS11-206ENST00000614944 C14orf80Q86SX3 495 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 CCDC13Q8IYE1 715 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 SLC17A8Q8NDX2 589 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 TEKT4Q8WW24 435 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 MAIP1Q8WWC4 291 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 PPP1R13BQ96KQ4 1090 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
VPS11-206ENST00000614944 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 NKRFO15226 690 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS11-206ENST00000614944 FOXN1O15353 648 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 TLR2O60603 784 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PENKP01210 267 aaPredicted RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 SSBP05455 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS11-206ENST00000614944 FUT4P22083 530 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 CNGA1P29973 690 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 ZNF131P52739 623 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms